CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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hnrnph3
(
Xenopus tropicalis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSXETG00000023567
T42952_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXETP00000050855
RRM
36
105
VRLRGLPFGCSKEEIVQFFSGLRIVPNGITLTVDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIE
ENSXETP00000050855
RRM
213
280
VHMRGLPFRATESDIANFFSPLTPIRVHIDVGADGRATGEADVEFATHEDAVAAMSKDKNNMQHRYIE
Links
Other
RRM
family RBPs
Other
Xenopus tropicalis
RBPs
46 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FGSG_12967
Fusarium graminearum
FGSG_12967
N
0.000
SS1G_11435
Sclerotinia sclerotiorum
SS1G_11435
N
0.000
estExt_fgenesh1_pg.C_sca_3_chr4_2_00789
Nectria haematococca
estExt_fgenesh1_pg.C_sca_3_chr4_2_00789
N
0.000