CC1G_07829 (Coprinopsis cinerea)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 CC1G_07829 T01275_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CC1G_07829T0 CCCH ZF 514 539

Links

Other CCCH ZF family RBPs
Other Coprinopsis cinerea RBPs

122 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29805.m001499 Ricinus communis 29805.m001499 N 0.731
72073 Helobdella robusta 72073 N 0.769
AAH77826 Xenopus laevis AAH77826 N 0.731
AB07703.1 Alternaria brassicicola AB07703.1 N 0.808
ACL082W Ashbya gossypii ACL082W N 0.731
ACLA_016930 Aspergillus clavatus CADACLAG00000891 N 0.808
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.769
amel4_ncbi_hmm11607 Apis mellifera amel4_ncbi_hmm11607 N 0.731
Ame_R017931 Ailuropoda melanoleuca Ame_R017931 N 0.731
An14g05330 Aspergillus niger CADANGAG00011470 N 0.769
ANIA_06922 Aspergillus nidulans CADANIAG00007728 N 0.769
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.808
AT2G20280 Arabidopsis thaliana AT2G20280-TAIR-G N 0.731
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.808
B9HM02_POPTR Populus trichocarpa POPTR_0008s04540 N 0.731
BAD89267 Xenopus laevis BAD89267 N 0.731
BC1G_06447 Botrytis cinerea BC1G_06447 N 0.769
BDBG_01641 Blastomyces dermatitidis BDBG_01641 N 0.769
BRADI2G54220 Brachypodium distachyon BRADI2G54220 N 0.731
CAGL0J08679g Candida glabrata CAGL0J08679g N 0.731
CAOG_04504 Capsaspora owczarzaki CAOG_04504 N 0.731
CIMG_09790 Coccidioides immitis CIMG_09790 N 0.846
CNBG_3113 Cryptococcus neoformans CNBG_3113 N 0.846
CPAG_03559 Candida parapsilosis CPAG_03559 N 0.769
CPSG_09723 Coccidioides posadasii CPSG_09723 N 0.846
CTRG_02162 Candida tropicalis CTRG_02162 N 0.731
DGIL_AUG5s16g7t1 Acyrtosiphon pisum DGIL_AUG5s16g7t1 N 0.769
ENSCING00000006888 Ciona intestinalis ENSCING00000006888 N 0.731
ENSCPOG00000012965 Cavia porcellus ENSCPOG00000012965 N 0.731
ENSLAFG00000001563 Loxodonta africana ENSLAFG00000001563 N 0.731
ENSOCUG00000011903 Oryctolagus cuniculus ENSOCUG00000011903 N 0.731
ENSOPRG00000015790 Ochotona princeps ENSOPRG00000015790 N 0.731
ENSPPYG00000013004 Pongo pygmaeus ENSPPYG00000013004 N 0.731
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.769
estExt_fgenesh1_pm.C_180201 Phytophthora capsici estExt_fgenesh1_pm.C_180201 N 0.769
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.769
estExt_Genewise1.C_22051 Cryphonectria parasitica estExt_Genewise1.C_22051 N 0.769
estExt_Genewise1.C_30385 Mucor circinelloides estExt_Genewise1.C_30385 N 0.731
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 0.808
estExt_Genewise1Plus.C_31385 Mycosphaerella fijiensis estExt_Genewise1Plus.C_31385 N 0.808
estExt_gwp.C_6160004 Branchiostoma floridae estExt_gwp.C_6160004 N 0.731
e_gw.53.202.1 Nematostella vectensis e_gw.53.202.1 N 0.731
e_gw1.19.91.1 Melampsora laricis populina e_gw1.19.91.1 N 0.846
e_gw1.2.668.1 Sporobolomyces roseus e_gw1.2.668.1 N 0.885
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.885
fgenesh1_pg.00710_#_148 Aspergillus carbonarius fgenesh1_pg.00710_#_148 N 0.769
fgenesh1_pg.C_scaffold_3139000003 Phytophthora capsici fgenesh1_pg.C_scaffold_3139000003 N 0.769
GD10149 Drosophila simulans FBgn0181924 N 0.769
GK21573 Drosophila willistoni FBgn0223565 N 0.731
GRMZM2G032258 Zea mays GRMZM2G032258 N 0.731
gw1.1.348.1 Phycomyces blakesleeanus gw1.1.348.1 N 0.731
gwh2.4.391.1 Phanerochaete chrysosporium gwh2.4.391.1 N 0.923
HCAG_08348 Histoplasma capsulatum HCAG_08348 N 0.769
ITGAV Monodelphis domestica ENSMODG00000010653 N 0.731
KLLA0C13673g Kluyveromyces lactis KLLA0C13673g N 0.731
KLTH0G08162g Kluyveromyces thermotolerans KLTH0G08162g N 0.731
LOC100068634 Equus caballus ENSECAG00000017149 N 0.731
MCYG_02954 Microsporum canis MCYG_02954 N 0.808
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.808
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.808
Minc08580 Meloidogyne incognita Minc08580 N 0.769
nasonia_NCBI_hmm1144383 Nasonia vitripennis nasonia_NCBI_hmm1144383 N 0.731
NCU01795 Neurospora crassa NCU01795 N 0.769
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.769
PABG_07629 Paracoccidioides brasiliensis PABG_07629 N 0.808
PASA_GEN_1200032 Daphnia pulex PASA_GEN_1200032 N 0.731
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.808
Pc21g03130 Penicillium chrysogenum Pc21g03130 N 0.808
PDK_20s1366191g001 Phoenix dactylifera PDK_20s1366191g001 N 0.731
PGTG_08922 Puccinia graminis PGTG_08922 N 0.846
PGUG_02031 Candida guilliermondii PGUG_02031 N 0.769
PHUM521160 Pediculus humanus PHUM521160 N 0.731
PITG_04608 Phytophthora infestans PITG_04608 N 0.808
PMAA_036360 Penicillium marneffei PMAA_036360 N 0.731
PTTG_08784 Puccinia triticina PTTG_08784 N 0.808
Q6DD06 Xenopus laevis Q6DD06 N 0.731
SAKL0E09966g Lachancea kluyveri SAKL0E09966g N 0.731
SPPG_00188 Spizellomyces punctatus SPPG_00188 N 0.731
SS1G_13466 Sclerotinia sclerotiorum SS1G_13466 N 0.769
s_451242 Phytophthora sojae s_451242 N 0.808
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.808
TERG_01412 Trichophyton rubrum TERG_01412 N 0.808
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.808
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.808
UREG_04706 Uncinocarpus reesii UREG_04706 N 0.808
VDAG_08863 Verticillium dahliae VDAG_08863 N 0.731
VDBG_05241 Verticillium albo atrum VDBG_05241 N 0.731
XM_002883888.1 Arabidopsis lyrata fgenesh2_kg.3__3143__AT2G20280.1 N 0.731
XP_002158150.1 Hydra magnipapillata XP_002158150.1 N 0.731
ZC3H15 Otolemur garnettii ENSOGAG00000002182 N 0.731
ZC3H15 Meleagris gallopavo ENSMGAG00000004447 N 0.731
ZC3H15 Gorilla gorilla ENSGGOG00000000073 N 0.731
ZC3H15 Gasterosteus aculeatus ENSGACG00000011648 N 0.769
ZC3H15 Homo sapiens ENSG00000065548 N 0.731
ZC3H15 Felis catus ENSFCAG00000008213 N 0.731
Zc3h15 Dipodomys ordii ENSDORG00000011664 N 0.731
zc3h15 Danio rerio ENSDARG00000015889 N 0.769
ZC3H15 Callithrix jacchus ENSCJAG00000005931 N 0.731
ZC3H15 Choloepus hoffmanni ENSCHOG00000011958 N 0.731
ZC3H15 Canis familiaris ENSCAFG00000014494 N 0.731
ZC3H15 Microcebus murinus ENSMICG00000014245 N 0.731
ZC3H15 Myotis lucifugus ENSMLUG00000007741 N 0.731
ZC3H15 Vicugna pacos ENSVPAG00000006980 N 0.731
ZC3H15 Tursiops truncatus ENSTTRG00000012425 N 0.731
ZC3H15 Tarsius syrichta ENSTSYG00000011019 N 0.731
ZC3H15 Takifugu rubripes ENSTRUG00000004988 N 0.769
ZC3H15 Tetraodon nigroviridis ENSTNIG00000009860 N 0.731
ZC3H15 Taeniopygia guttata ENSTGUG00000011131 N 0.731
ZC3H15 Tupaia belangeri ENSTBEG00000015530 N 0.731
ZC3H15 Spermophilus tridecemlineatus ENSSTOG00000006873 N 0.731
Zc3h15 Rattus norvegicus ENSRNOG00000005256 N 0.731
ZC3H15 Pteropus vampyrus ENSPVAG00000004828 N 0.731
ZC3H15 Macaca mulatta ENSMMUG00000017248 N 0.731
Zc3h15 Mus musculus ENSMUSG00000027091 N 0.731
ZC3H15 Ornithorhynchus anatinus ENSOANG00000015742 N 0.731
ZC3H15 Sus scrofa ENSSSCG00000016026 N 0.731
ZC3H15 Oryzias latipes ENSORLG00000018606 N 0.769
ZC3H15 Sorex araneus ENSSARG00000012071 N 0.731
ZC3H15 Procavia capensis ENSPCAG00000008499 N 0.731
ZC3H15 Pan troglodytes ENSPTRG00000012717 N 0.731
ZC3HF_BOVIN Bos taurus ENSBTAG00000021762 N 0.731
ZC3HF_CHICK Gallus gallus ENSGALG00000002670 N 0.731