CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PABG_03020
(
Paracoccidioides brasiliensis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
PABG_03020
T01480_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PABG_03020T0
CCCH ZF
273
297
SPAVCKYWLSTGQCLRADCRFSHDL
PABG_03020T0
CCCH ZF
301
322
VCKYWLSGSCLAGEGCPFSHDP
Links
Other
CCCH ZF
family RBPs
Other
Paracoccidioides brasiliensis
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh3_pg.C_scaffold_12000111
Laccaria bicolor
fgenesh3_pg.C_scaffold_12000111
N
0.000