CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
AFUA_4G13020
(
Aspergillus fumigatus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CADAFUAG00007954
T02049_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAFUAP00007954
CCCH ZF
279
303
SPVVCKYWLSTGQCLRADCRFSHDL
CADAFUAP00007954
CCCH ZF
307
328
VCKYWIMGNCLAGDGCPFSHDP
Links
Other
CCCH ZF
family RBPs
Other
Aspergillus fumigatus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NFIA_103330
Neosartorya fischeri
CADNFIAG00010242
N
1.000
ACLA_052020
Aspergillus clavatus
CADACLAG00005073
N
0.979
An01g08600
Aspergillus niger
CADANGAG00000860
N
0.957
fgenesh1_pm.00009_#_468
Aspergillus carbonarius
fgenesh1_pm.00009_#_468
N
0.957
AFLA_051800
Aspergillus flavus
CADAFLAG00011171
N
0.957
AO090009000286
Aspergillus oryzae
CADAORAG00003756
N
0.957
ATEG_03185
Aspergillus terreus
CADATEAG00008323
N
0.957
Pc22g02970
Penicillium chrysogenum
Pc22g02970
N
0.939
ANIA_03578
Aspergillus nidulans
CADANIAG00005166
N
0.938
BDBG_02229
Blastomyces dermatitidis
BDBG_02229
N
0.936
CPSG_09242
Coccidioides posadasii
CPSG_09242
N
0.936
UREG_00636
Uncinocarpus reesii
UREG_00636
N
0.936
CIMG_00632
Coccidioides immitis
CIMG_00632
N
0.936
ARB_00116
Arthroderma benhamiae
ARB_00116
N
0.915
TRV_06656
Trichophyton verrucosum
TRV_06656
N
0.915
PMAA_081480
Penicillium marneffei
PMAA_081480
N
0.915
HCAG_07022
Histoplasma capsulatum
HCAG_07022
N
0.915
TERG_07499
Trichophyton rubrum
TERG_07499
N
0.915
MGYG_01632
Microsporum gypseum
MGYG_01632
N
0.894
PABG_03020
Paracoccidioides brasiliensis
PABG_03020
N
0.894
MCYG_01086
Microsporum canis
MCYG_01086
N
0.894
SS1G_04219
Sclerotinia sclerotiorum
SS1G_04219
N
0.830
BC1G_00189
Botrytis cinerea
BC1G_00189
N
0.830
GLRG_01552
Colletotrichum graminicola
GLRG_01552
N
0.771
fgenesh1_pm.sca_3_chr4_2_0000335
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000335
N
0.771
e_gw1.5.87.1
Trichoderma reesei
e_gw1.5.87.1
N
0.771
FGSG_12995
Fusarium graminearum
FGSG_12995
N
0.771
fgenesh2_pm.1_#_1003
Thielavia terrestris
fgenesh2_pm.1_#_1003
N
0.766
VDAG_04286
Verticillium dahliae
VDAG_04286
N
0.750
estExt_Genewise1Plus.C_13473
Trichoderma atroviride
estExt_Genewise1Plus.C_13473
N
0.750
fgenesh1_pg.C_scaffold_7000377
Trichoderma virens
fgenesh1_pg.C_scaffold_7000377
N
0.750
FVEG_05147
Fusarium verticillioides
FVEG_05147
N
0.750
FOXG_01987
Fusarium oxysporum
FOXG_01987
N
0.750
NCU07418
Neurospora crassa
NCU07418
N
0.745
estExt_Genewise1.C_290124
Neurospora tetrasperma
estExt_Genewise1.C_290124
N
0.745
estExt_Genewise1Plus.C_40825
Neurospora discreta
estExt_Genewise1Plus.C_40825
N
0.745
Pa_1_10420
Podospora anserina
Pa_1_10420
N
0.745
MGG_04405
Magnaporthe oryzae
MGG_04405
N
0.723
GSTUMT00011195001
Tuber melanosporum
GSTUMT00011195001
N
0.720