CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BDBG_02229
(
Blastomyces dermatitidis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
BDBG_02229
T01223_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BDBG_02229T0
CCCH ZF
272
296
SPVVCKYWLSTGQCLRADCRFSHDL
BDBG_02229T0
CCCH ZF
300
321
VCKYWLQGSCLAGDGCPFSHDP
Links
Other
CCCH ZF
family RBPs
Other
Blastomyces dermatitidis
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HCAG_07022
Histoplasma capsulatum
HCAG_07022
N
0.979
AFUA_4G13020
Aspergillus fumigatus
CADAFUAG00007954
N
0.936
ACLA_052020
Aspergillus clavatus
CADACLAG00005073
N
0.936
NFIA_103330
Neosartorya fischeri
CADNFIAG00010242
N
0.936
PABG_03020
Paracoccidioides brasiliensis
PABG_03020
N
0.936
AFLA_051800
Aspergillus flavus
CADAFLAG00011171
N
0.915
CIMG_00632
Coccidioides immitis
CIMG_00632
N
0.915
fgenesh1_pm.00009_#_468
Aspergillus carbonarius
fgenesh1_pm.00009_#_468
N
0.915
ATEG_03185
Aspergillus terreus
CADATEAG00008323
N
0.915
AO090009000286
Aspergillus oryzae
CADAORAG00003756
N
0.915
UREG_00636
Uncinocarpus reesii
UREG_00636
N
0.915
An01g08600
Aspergillus niger
CADANGAG00000860
N
0.915
CPSG_09242
Coccidioides posadasii
CPSG_09242
N
0.915
Pc22g02970
Penicillium chrysogenum
Pc22g02970
N
0.898
ANIA_03578
Aspergillus nidulans
CADANIAG00005166
N
0.896
ARB_00116
Arthroderma benhamiae
ARB_00116
N
0.894
TERG_07499
Trichophyton rubrum
TERG_07499
N
0.894
TRV_06656
Trichophyton verrucosum
TRV_06656
N
0.894
PMAA_081480
Penicillium marneffei
PMAA_081480
N
0.872
MGYG_01632
Microsporum gypseum
MGYG_01632
N
0.872
MCYG_01086
Microsporum canis
MCYG_01086
N
0.872
BC1G_00189
Botrytis cinerea
BC1G_00189
N
0.787
SS1G_04219
Sclerotinia sclerotiorum
SS1G_04219
N
0.787
fgenesh2_pm.1_#_1003
Thielavia terrestris
fgenesh2_pm.1_#_1003
N
0.745
GSTUMT00011195001
Tuber melanosporum
GSTUMT00011195001
N
0.740
FGSG_12995
Fusarium graminearum
FGSG_12995
N
0.729
GLRG_01552
Colletotrichum graminicola
GLRG_01552
N
0.729
fgenesh1_pm.sca_3_chr4_2_0000335
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000335
N
0.729
Pa_1_10420
Podospora anserina
Pa_1_10420
N
0.723
NCU07418
Neurospora crassa
NCU07418
N
0.723
estExt_Genewise1.C_290124
Neurospora tetrasperma
estExt_Genewise1.C_290124
N
0.723
estExt_Genewise1Plus.C_40825
Neurospora discreta
estExt_Genewise1Plus.C_40825
N
0.723
e_gw1.5.87.1
Trichoderma reesei
e_gw1.5.87.1
N
0.708
VDAG_04286
Verticillium dahliae
VDAG_04286
N
0.708
FVEG_05147
Fusarium verticillioides
FVEG_05147
N
0.708
FOXG_01987
Fusarium oxysporum
FOXG_01987
N
0.708
fgenesh1_pg.C_scaffold_7000377
Trichoderma virens
fgenesh1_pg.C_scaffold_7000377
N
0.708
estExt_Genewise1Plus.C_13473
Trichoderma atroviride
estExt_Genewise1Plus.C_13473
N
0.708
MGG_04405
Magnaporthe oryzae
MGG_04405
N
0.702