fgenesh2_pm.1_#_1003 (Thielavia terrestris)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 fgenesh2_pm.1_#_1003 T05325_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pm.1_#_1003 CCCH ZF 279 303
fgenesh2_pm.1_#_1003 CCCH ZF 307 328

Links

Other CCCH ZF family RBPs
Other Thielavia terrestris RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Pa_1_10420 Podospora anserina Pa_1_10420 N 0.936
estExt_Genewise1Plus.C_40825 Neurospora discreta estExt_Genewise1Plus.C_40825 N 0.915
NCU07418 Neurospora crassa NCU07418 N 0.915
estExt_Genewise1.C_290124 Neurospora tetrasperma estExt_Genewise1.C_290124 N 0.915
fgenesh1_pm.sca_3_chr4_2_0000335 Nectria haematococca fgenesh1_pm.sca_3_chr4_2_0000335 N 0.854
FGSG_12995 Fusarium graminearum FGSG_12995 N 0.854
estExt_Genewise1Plus.C_13473 Trichoderma atroviride estExt_Genewise1Plus.C_13473 N 0.854
GLRG_01552 Colletotrichum graminicola GLRG_01552 N 0.854
fgenesh1_pg.C_scaffold_7000377 Trichoderma virens fgenesh1_pg.C_scaffold_7000377 N 0.854
SS1G_04219 Sclerotinia sclerotiorum SS1G_04219 N 0.851
BC1G_00189 Botrytis cinerea BC1G_00189 N 0.851
e_gw1.5.87.1 Trichoderma reesei e_gw1.5.87.1 N 0.833
VDAG_04286 Verticillium dahliae VDAG_04286 N 0.833
FVEG_05147 Fusarium verticillioides FVEG_05147 N 0.833
FOXG_01987 Fusarium oxysporum FOXG_01987 N 0.833
MGG_04405 Magnaporthe oryzae MGG_04405 N 0.809
UREG_00636 Uncinocarpus reesii UREG_00636 N 0.787
fgenesh1_pm.00009_#_468 Aspergillus carbonarius fgenesh1_pm.00009_#_468 N 0.787
ACLA_052020 Aspergillus clavatus CADACLAG00005073 N 0.787
AO090009000286 Aspergillus oryzae CADAORAG00003756 N 0.787
AFLA_051800 Aspergillus flavus CADAFLAG00011171 N 0.787
PMAA_081480 Penicillium marneffei PMAA_081480 N 0.787
CPSG_09242 Coccidioides posadasii CPSG_09242 N 0.787
ATEG_03185 Aspergillus terreus CADATEAG00008323 N 0.787
CIMG_00632 Coccidioides immitis CIMG_00632 N 0.787
An01g08600 Aspergillus niger CADANGAG00000860 N 0.787
ANIA_03578 Aspergillus nidulans CADANIAG00005166 N 0.771
NFIA_103330 Neosartorya fischeri CADNFIAG00010242 N 0.766
e_gw1.6.94.1 Cryphonectria parasitica e_gw1.6.94.1 N 0.766
HCAG_07022 Histoplasma capsulatum HCAG_07022 N 0.766
ARB_00116 Arthroderma benhamiae ARB_00116 N 0.766
AFUA_4G13020 Aspergillus fumigatus CADAFUAG00007954 N 0.766
MCYG_01086 Microsporum canis MCYG_01086 N 0.766
TRV_06656 Trichophyton verrucosum TRV_06656 N 0.766
MGYG_01632 Microsporum gypseum MGYG_01632 N 0.766
TERG_07499 Trichophyton rubrum TERG_07499 N 0.766
GSTUMT00011195001 Tuber melanosporum GSTUMT00011195001 N 0.760
Pc22g02970 Penicillium chrysogenum Pc22g02970 N 0.755
BDBG_02229 Blastomyces dermatitidis BDBG_02229 N 0.745
PABG_03020 Paracoccidioides brasiliensis PABG_03020 N 0.723