Pc22g02970 (Penicillium chrysogenum)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Pc22g02970 T06459_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pc22g02970.t1 CCCH ZF 280 304
Pc22g02970.t1 CCCH ZF 306 329

Links

Other CCCH ZF family RBPs
Other Penicillium chrysogenum RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ANIA_03578 Aspergillus nidulans CADANIAG00005166 N 0.959
ACLA_052020 Aspergillus clavatus CADACLAG00005073 N 0.959
An01g08600 Aspergillus niger CADANGAG00000860 N 0.939
AFLA_051800 Aspergillus flavus CADAFLAG00011171 N 0.939
fgenesh1_pm.00009_#_468 Aspergillus carbonarius fgenesh1_pm.00009_#_468 N 0.939
AFUA_4G13020 Aspergillus fumigatus CADAFUAG00007954 N 0.939
AO090009000286 Aspergillus oryzae CADAORAG00003756 N 0.939
ATEG_03185 Aspergillus terreus CADATEAG00008323 N 0.939
NFIA_103330 Neosartorya fischeri CADNFIAG00010242 N 0.939
CIMG_00632 Coccidioides immitis CIMG_00632 N 0.898
BDBG_02229 Blastomyces dermatitidis BDBG_02229 N 0.898
UREG_00636 Uncinocarpus reesii UREG_00636 N 0.898
CPSG_09242 Coccidioides posadasii CPSG_09242 N 0.898
TRV_06656 Trichophyton verrucosum TRV_06656 N 0.878
TERG_07499 Trichophyton rubrum TERG_07499 N 0.878
ARB_00116 Arthroderma benhamiae ARB_00116 N 0.878
HCAG_07022 Histoplasma capsulatum HCAG_07022 N 0.878
PMAA_081480 Penicillium marneffei PMAA_081480 N 0.878
MGYG_01632 Microsporum gypseum MGYG_01632 N 0.857
PABG_03020 Paracoccidioides brasiliensis PABG_03020 N 0.857
MCYG_01086 Microsporum canis MCYG_01086 N 0.857
SS1G_04219 Sclerotinia sclerotiorum SS1G_04219 N 0.816
BC1G_00189 Botrytis cinerea BC1G_00189 N 0.816
FGSG_12995 Fusarium graminearum FGSG_12995 N 0.796
fgenesh1_pm.sca_3_chr4_2_0000335 Nectria haematococca fgenesh1_pm.sca_3_chr4_2_0000335 N 0.796
GLRG_01552 Colletotrichum graminicola GLRG_01552 N 0.796
fgenesh1_pg.C_scaffold_7000377 Trichoderma virens fgenesh1_pg.C_scaffold_7000377 N 0.776
estExt_Genewise1Plus.C_13473 Trichoderma atroviride estExt_Genewise1Plus.C_13473 N 0.776
VDAG_04286 Verticillium dahliae VDAG_04286 N 0.776
FVEG_05147 Fusarium verticillioides FVEG_05147 N 0.776
FOXG_01987 Fusarium oxysporum FOXG_01987 N 0.776
fgenesh2_pm.1_#_1003 Thielavia terrestris fgenesh2_pm.1_#_1003 N 0.755
e_gw1.5.87.1 Trichoderma reesei e_gw1.5.87.1 N 0.755
estExt_Genewise1.C_290124 Neurospora tetrasperma estExt_Genewise1.C_290124 N 0.735
Pa_1_10420 Podospora anserina Pa_1_10420 N 0.735
NCU07418 Neurospora crassa NCU07418 N 0.735
estExt_Genewise1Plus.C_40825 Neurospora discreta estExt_Genewise1Plus.C_40825 N 0.735
GSTUMT00011195001 Tuber melanosporum GSTUMT00011195001 N 0.720
MGG_04405 Magnaporthe oryzae MGG_04405 N 0.714