CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ACLA_052020
(
Aspergillus clavatus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
CADACLAG00005073
T02028_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADACLAP00004972
CCCH ZF
280
304
SPVVCKYWLSTGQCLRADCRFSHDL
CADACLAP00004972
CCCH ZF
308
329
VCKYWVMGNCLAGDGCPFSHDP
Links
Other
CCCH ZF
family RBPs
Other
Aspergillus clavatus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ATEG_03185
Aspergillus terreus
CADATEAG00008323
N
0.979
AFLA_051800
Aspergillus flavus
CADAFLAG00011171
N
0.979
fgenesh1_pm.00009_#_468
Aspergillus carbonarius
fgenesh1_pm.00009_#_468
N
0.979
AO090009000286
Aspergillus oryzae
CADAORAG00003756
N
0.979
NFIA_103330
Neosartorya fischeri
CADNFIAG00010242
N
0.979
AFUA_4G13020
Aspergillus fumigatus
CADAFUAG00007954
N
0.979
An01g08600
Aspergillus niger
CADANGAG00000860
N
0.979
Pc22g02970
Penicillium chrysogenum
Pc22g02970
N
0.959
ANIA_03578
Aspergillus nidulans
CADANIAG00005166
N
0.958
CIMG_00632
Coccidioides immitis
CIMG_00632
N
0.936
CPSG_09242
Coccidioides posadasii
CPSG_09242
N
0.936
UREG_00636
Uncinocarpus reesii
UREG_00636
N
0.936
BDBG_02229
Blastomyces dermatitidis
BDBG_02229
N
0.936
ARB_00116
Arthroderma benhamiae
ARB_00116
N
0.915
TRV_06656
Trichophyton verrucosum
TRV_06656
N
0.915
TERG_07499
Trichophyton rubrum
TERG_07499
N
0.915
HCAG_07022
Histoplasma capsulatum
HCAG_07022
N
0.915
PMAA_081480
Penicillium marneffei
PMAA_081480
N
0.915
MCYG_01086
Microsporum canis
MCYG_01086
N
0.894
MGYG_01632
Microsporum gypseum
MGYG_01632
N
0.894
PABG_03020
Paracoccidioides brasiliensis
PABG_03020
N
0.894
BC1G_00189
Botrytis cinerea
BC1G_00189
N
0.851
SS1G_04219
Sclerotinia sclerotiorum
SS1G_04219
N
0.851
FGSG_12995
Fusarium graminearum
FGSG_12995
N
0.792
GLRG_01552
Colletotrichum graminicola
GLRG_01552
N
0.792
fgenesh1_pm.sca_3_chr4_2_0000335
Nectria haematococca
fgenesh1_pm.sca_3_chr4_2_0000335
N
0.792
fgenesh2_pm.1_#_1003
Thielavia terrestris
fgenesh2_pm.1_#_1003
N
0.787
VDAG_04286
Verticillium dahliae
VDAG_04286
N
0.771
estExt_Genewise1Plus.C_13473
Trichoderma atroviride
estExt_Genewise1Plus.C_13473
N
0.771
fgenesh1_pg.C_scaffold_7000377
Trichoderma virens
fgenesh1_pg.C_scaffold_7000377
N
0.771
FOXG_01987
Fusarium oxysporum
FOXG_01987
N
0.771
FVEG_05147
Fusarium verticillioides
FVEG_05147
N
0.771
estExt_Genewise1.C_290124
Neurospora tetrasperma
estExt_Genewise1.C_290124
N
0.766
Pa_1_10420
Podospora anserina
Pa_1_10420
N
0.766
estExt_Genewise1Plus.C_40825
Neurospora discreta
estExt_Genewise1Plus.C_40825
N
0.766
NCU07418
Neurospora crassa
NCU07418
N
0.766
e_gw1.5.87.1
Trichoderma reesei
e_gw1.5.87.1
N
0.750
MGG_04405
Magnaporthe oryzae
MGG_04405
N
0.745
GSTUMT00011195001
Tuber melanosporum
GSTUMT00011195001
N
0.720