MBNL3 (Oryctolagus cuniculus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSOCUG00000014979 T03060_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.891
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.891
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000012871 CCCH ZF 17 41
ENSOCUP00000012871 CCCH ZF 58 73
ENSOCUP00000012871 CCCH ZF 175 201
ENSOCUP00000012871 CCCH ZF 212 235
ENSOCUP00000015512 CCCH ZF 17 41
ENSOCUP00000015512 CCCH ZF 58 73
ENSOCUP00000015512 CCCH ZF 175 201
ENSOCUP00000015512 CCCH ZF 212 235
ENSOCUP00000021275 CCCH ZF 17 41
ENSOCUP00000021275 CCCH ZF 58 73
ENSOCUP00000021275 CCCH ZF 175 201
ENSOCUP00000021275 CCCH ZF 212 235

Links

Other CCCH ZF family RBPs
Other Oryctolagus cuniculus RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTTG_01306 Puccinia triticina PTTG_01306 N 0.000
PTTG_08330 Puccinia triticina PTTG_08330 N 0.000
PTTG_09070 Puccinia triticina PTTG_09070 N 0.000
PTTG_10291 Puccinia triticina PTTG_10291 N 0.000
PTTG_10552 Puccinia triticina PTTG_10552 N 0.000
PTTG_11068 Puccinia triticina PTTG_11068 N 0.000
PTTG_11563 Puccinia triticina PTTG_11563 N 0.000