22086_YPL054W (Saccharomyces mikatae)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 22086_YPL054W T05875_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
22086_YPL054W CCCH ZF 88 113
22086_YPL054W CCCH ZF 122 143

Links

Other CCCH ZF family RBPs
Other Saccharomyces mikatae RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
23616_YPL054W Saccharomyces paradoxus 23616_YPL054W N 0.939
25080_YPL054W Saccharomyces bayanus 25080_YPL054W N 0.958
A7TTU4_VANPO Vanderwaltozyma polyspora A7TTU4_VANPO N 0.729
ADR062W Ashbya gossypii ADR062W N 0.740
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.714
CPAG_02338 Candida parapsilosis CPAG_02338 N 0.755
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.714
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.720
KLLA0B09878g Kluyveromyces lactis KLLA0B09878g N 0.740
LEE1 Saccharomyces cerevisiae YPL054W N 0.939
orf19.7385 Candida albicans orf19.7385 N 0.755
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.760
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.776
ZYRO0F08690g Zygosaccharomyces rouxii ZYRO0F08690g N 0.706