Cd36_85970 (Candida dubliniensis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Cd36_85970 T05989_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cd36_85970 CCCH ZF 116 140
Cd36_85970 CCCH ZF 148 169

Links

Other CCCH ZF family RBPs
Other Candida dubliniensis RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.957
orf19.7385 Candida albicans orf19.7385 N 0.957
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.938
CLUG_02022 Candida lusitaniae CLUG_02022 N 0.917
CTRG_02259 Candida tropicalis CTRG_02259 N 0.878
CPAG_02338 Candida parapsilosis CPAG_02338 N 0.851
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.800
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.792
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.766
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.766
YALI0B12540g Yarrowia lipolytica YALI0B12540g N 0.755
PTRG_01963 Pyrenophora tritici repentis PTRG_01963 N 0.740
SNOG_02658 Stagonospora nodorum SNOG_02658 N 0.740
estExt_fgenesh1_pg.C_160206 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160206 N 0.740
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.740
KLLA0B09878g Kluyveromyces lactis KLLA0B09878g N 0.740
EAT89389.2 Phaeosphaeria nodorum EAT89389.2 N 0.740
AB08315.1 Alternaria brassicicola AB08315.1 N 0.740
ADR062W Ashbya gossypii ADR062W N 0.740
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.735
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.735
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.735
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.735
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.729
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.729
ZYRO0F08690g Zygosaccharomyces rouxii ZYRO0F08690g N 0.725
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.720
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.720
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.720
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.720
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.720
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.720
22086_YPL054W Saccharomyces mikatae 22086_YPL054W N 0.714
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.714
25080_YPL054W Saccharomyces bayanus 25080_YPL054W N 0.714
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.714
NCU05007 Neurospora crassa NCU05007 N 0.714
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.714
A7TTU4_VANPO Vanderwaltozyma polyspora A7TTU4_VANPO N 0.708
KLTH0E11836g Kluyveromyces thermotolerans KLTH0E11836g N 0.700
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.700
23616_YPL054W Saccharomyces paradoxus 23616_YPL054W N 0.700
LEE1 Saccharomyces cerevisiae YPL054W N 0.700