fgenesh2_pg.15_#_380 (Fragilariopsis cylindrus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 fgenesh2_pg.15_#_380 T14141_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.15_#_380 CCHC ZF 144 161

Links

Other CCHC ZF family RBPs
Other Fragilariopsis cylindrus RBPs

1 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_024590 Aspergillus clavatus CADACLAG00002524 N 0.000
AFLA_068630 Aspergillus flavus CADAFLAG00008287 N 0.000
AFUA_1G10920 Aspergillus fumigatus CADAFUAG00007692 N 0.000
An08g03180 Aspergillus niger CADANGAG00006637 N 0.000
ANIA_01188 Aspergillus nidulans CADANIAG00001437 N 0.000
AO090038000318 Aspergillus oryzae CADAORAG00009105 N 0.000
ARB_02854 Arthroderma benhamiae ARB_02854 N 0.000
ATEG_00286 Aspergillus terreus CADATEAG00009538 N 0.000
BDBG_00241 Blastomyces dermatitidis BDBG_00241 N 0.000
CIMG_06929 Coccidioides immitis CIMG_06929 N 0.000
CPSG_09587 Coccidioides posadasii CPSG_09587 N 0.000
e_gw1.00083.460.1 Aspergillus carbonarius e_gw1.00083.460.1 N 0.000
HCAG_01782 Histoplasma capsulatum HCAG_01782 N 0.000
MCYG_01582 Microsporum canis MCYG_01582 N 0.000
MGYG_04491 Microsporum gypseum MGYG_04491 N 0.000
PABG_00485 Paracoccidioides brasiliensis PABG_00485 N 0.000
PMAA_042630 Penicillium marneffei PMAA_042630 N 0.000
TERG_07903 Trichophyton rubrum TERG_07903 N 0.000
TESG_05610 Trichophyton tonsurans TESG_05610 N 0.000
UREG_05919 Uncinocarpus reesii UREG_05919 N 0.000