CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MCYG_01582
(
Microsporum canis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MCYG_01582
T29681_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_01582T0
RRM
112
185
VYVTAIPLDATLSEISSLFSKCGVIAEEIDSGQPRIKMYTDDQGQFKGDALVVYFRPESVNLAVQMLDDTDFRF
MCYG_01582T0
RRM
274
329
KEDIREECAKLGEVTNVVLYDKEESGVATVRFSEPDCAQACVQMMNGRFFGGTKVE
Links
Other
RRM
family RBPs
Other
Microsporum canis
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TERG_07903
Trichophyton rubrum
TERG_07903
N
0.923
ARB_02854
Arthroderma benhamiae
ARB_02854
N
0.915
MGYG_04491
Microsporum gypseum
MGYG_04491
N
0.915
TESG_05610
Trichophyton tonsurans
TESG_05610
N
0.915
UREG_05919
Uncinocarpus reesii
UREG_05919
N
0.823
TRV_05547
Trichophyton verrucosum
TRV_05547
N
0.815
CPSG_09587
Coccidioides posadasii
CPSG_09587
N
0.808
CIMG_06929
Coccidioides immitis
CIMG_06929
N
0.808
ANIA_01188
Aspergillus nidulans
CADANIAG00001437
N
0.792
BDBG_00241
Blastomyces dermatitidis
BDBG_00241
N
0.769
PABG_00485
Paracoccidioides brasiliensis
PABG_00485
N
0.762
HCAG_01782
Histoplasma capsulatum
HCAG_01782
N
0.762
e_gw1.00083.460.1
Aspergillus carbonarius
e_gw1.00083.460.1
N
0.754
ACLA_024590
Aspergillus clavatus
CADACLAG00002524
N
0.746
PMAA_042630
Penicillium marneffei
PMAA_042630
N
0.746
An08g03180
Aspergillus niger
CADANGAG00006637
N
0.746
ATEG_00286
Aspergillus terreus
CADATEAG00009538
N
0.738
AO090038000318
Aspergillus oryzae
CADAORAG00009105
N
0.731
AFLA_068630
Aspergillus flavus
CADAFLAG00008287
N
0.731
AFUA_1G10920
Aspergillus fumigatus
CADAFUAG00007692
N
0.723
NFIA_014720
Neosartorya fischeri
CADNFIAG00001794
N
0.723