An08g03180 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00006637 T33558_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00006513 RRM 113 185
CADANGAP00006513 RRM 277 332

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.00083.460.1 Aspergillus carbonarius e_gw1.00083.460.1 N 0.915
ACLA_024590 Aspergillus clavatus CADACLAG00002524 N 0.885
NFIA_014720 Neosartorya fischeri CADNFIAG00001794 N 0.869
AFUA_1G10920 Aspergillus fumigatus CADAFUAG00007692 N 0.869
PMAA_042630 Penicillium marneffei PMAA_042630 N 0.868
AO090038000318 Aspergillus oryzae CADAORAG00009105 N 0.854
AFLA_068630 Aspergillus flavus CADAFLAG00008287 N 0.854
ANIA_01188 Aspergillus nidulans CADANIAG00001437 N 0.846
ATEG_00286 Aspergillus terreus CADATEAG00009538 N 0.846
CPSG_09587 Coccidioides posadasii CPSG_09587 N 0.829
CIMG_06929 Coccidioides immitis CIMG_06929 N 0.829
UREG_05919 Uncinocarpus reesii UREG_05919 N 0.823
PABG_00485 Paracoccidioides brasiliensis PABG_00485 N 0.800
ARB_02854 Arthroderma benhamiae ARB_02854 N 0.785
HCAG_01782 Histoplasma capsulatum HCAG_01782 N 0.785
BDBG_00241 Blastomyces dermatitidis BDBG_00241 N 0.785
TERG_07903 Trichophyton rubrum TERG_07903 N 0.777
TESG_05610 Trichophyton tonsurans TESG_05610 N 0.777
MGYG_04491 Microsporum gypseum MGYG_04491 N 0.762
MCYG_01582 Microsporum canis MCYG_01582 N 0.746
e_gw1.3.309.1 Trichoderma reesei e_gw1.3.309.1 N 0.700