CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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BDBG_00241
(
Blastomyces dermatitidis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
BDBG_00241
T28270_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
BDBG_00241T0
RRM
126
199
VYVTSIPLDASLEEVNDVFSKCGVIAEEIDRRRPRIKLYTDDEGKFKGDALIVYFRPESVNLAIQMLDDTDFRF
BDBG_00241T0
RRM
290
345
KEDIRQECSKLGEVTNVVLYDKEEEGVASVRFSDVESANICVQKMDGRFFSGTRVV
Links
Other
RRM
family RBPs
Other
Blastomyces dermatitidis
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HCAG_01782
Histoplasma capsulatum
HCAG_01782
N
0.938
PABG_00485
Paracoccidioides brasiliensis
PABG_00485
N
0.931
ATEG_00286
Aspergillus terreus
CADATEAG00009538
N
0.800
UREG_05919
Uncinocarpus reesii
UREG_05919
N
0.792
e_gw1.00083.460.1
Aspergillus carbonarius
e_gw1.00083.460.1
N
0.792
ACLA_024590
Aspergillus clavatus
CADACLAG00002524
N
0.792
ANIA_01188
Aspergillus nidulans
CADANIAG00001437
N
0.785
An08g03180
Aspergillus niger
CADANGAG00006637
N
0.785
ARB_02854
Arthroderma benhamiae
ARB_02854
N
0.777
TERG_07903
Trichophyton rubrum
TERG_07903
N
0.777
TESG_05610
Trichophyton tonsurans
TESG_05610
N
0.777
MGYG_04491
Microsporum gypseum
MGYG_04491
N
0.777
MCYG_01582
Microsporum canis
MCYG_01582
N
0.769
NFIA_014720
Neosartorya fischeri
CADNFIAG00001794
N
0.769
AFLA_068630
Aspergillus flavus
CADAFLAG00008287
N
0.769
AO090038000318
Aspergillus oryzae
CADAORAG00009105
N
0.769
AFUA_1G10920
Aspergillus fumigatus
CADAFUAG00007692
N
0.769
CPSG_09587
Coccidioides posadasii
CPSG_09587
N
0.762
CIMG_06929
Coccidioides immitis
CIMG_06929
N
0.762
PMAA_042630
Penicillium marneffei
PMAA_042630
N
0.731
TRV_05547
Trichophyton verrucosum
TRV_05547
N
0.715