FMR1 (Ornithorhynchus anatinus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOANG00000001097 T19155_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FMR1
M305_0.6 		Homo sapiens Sequence logo not available KAGCGRCUGG SELEX
Cook et al.(2011)
471_15805463.1 		0.908
FMR1
M304_0.6 		Homo sapiens Sequence logo not available GGGCKAAGGARK SELEX
Cook et al.(2011)
471_15805463 		0.908
FMR1
M016_0.6 		Homo sapiens KGACARG RNAcompete
Ray et al.(2013)
RNCMPT00016 		0.908
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000001743 KH 187 246
ENSOANP00000001743 KH 250 303
ENSOANP00000001744 KH 187 246
ENSOANP00000001744 KH 250 363

Links

Other KH family RBPs
Other Ornithorhynchus anatinus RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC59683 Xenopus laevis AAC59683 I 0.750
AAI12953 Xenopus laevis AAI12953 I 0.757
AAI70204 Xenopus laevis AAI70204 I 0.757
Ame_R006793 Ailuropoda melanoleuca Ame_R006793 I 0.770
ENSPPYG00000020797 Pongo pygmaeus ENSPPYG00000020797 I 0.902
FMR1 Pteropus vampyrus ENSPVAG00000013386 I 0.777
FMR1 Pan troglodytes ENSPTRG00000022349 I 0.947
FMR1 Procavia capensis ENSPCAG00000011936 N 0.923
FMR1 Ochotona princeps ENSOPRG00000012759 N 0.939
FMR1 Otolemur garnettii ENSOGAG00000013061 N 0.842
FMR1 Sorex araneus ENSSARG00000003475 N 0.904
FMR1 Sus scrofa ENSSSCG00000012727 I 0.783
FMR1 Spermophilus tridecemlineatus ENSSTOG00000003260 N 0.922
FMR1 Takifugu rubripes ENSTRUG00000005362 N 0.716
FMR1 Tursiops truncatus ENSTTRG00000000613 I 0.878
FMR1 Vicugna pacos ENSVPAG00000008700 I 0.777
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.750
FMR1 Taeniopygia guttata ENSTGUG00000004735 I 0.787
FMR1 Oryctolagus cuniculus ENSOCUG00000014621 N 0.947
Fmr1 Mus musculus ENSMUSG00000000838 I 0.922
FMR1 Anolis carolinensis ENSACAG00000007899 N 0.876
FMR1 Canis familiaris ENSCAFG00000019085 I 0.930
FMR1 Cavia porcellus ENSCPOG00000003723 N 0.915
FMR1 Felis catus ENSFCAG00000007228 I 0.781
FMR1 Dasypus novemcinctus ENSDNOG00000019486 I 0.734
Fmr1 Dipodomys ordii ENSDORG00000012501 N 0.921
FMR1 Echinops telfairi ENSETEG00000006061 I 0.811
FMR1 Homo sapiens ENSG00000102081 D 0.947
FMR1 Meleagris gallopavo ENSMGAG00000008270 N 0.893
FMR1 Monodelphis domestica ENSMODG00000005550 I 0.753
FMR1 Macaca mulatta ENSMMUG00000015814 I 0.947
FMR1 Gorilla gorilla ENSGGOG00000010373 N 0.947
FMR1 Loxodonta africana ENSLAFG00000013592 N 0.940
FMR1_RAT Rattus norvegicus ENSRNOG00000011900 I 0.882
FXR1 Dasypus novemcinctus ENSDNOG00000019065 I 0.744
Fxr1 Dipodomys ordii ENSDORG00000005853 I 0.744
LOC100414871 Callithrix jacchus ENSCJAG00000003925 I 0.948
P51113 Xenopus laevis P51113 I 0.750
Q0II33_BOVIN Bos taurus ENSBTAG00000012552 N 0.931
Q2KHP9 Xenopus laevis Q2KHP9 I 0.757
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.800