CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAI24888
(
Xenopus laevis
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
AAI24888
T23223_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI24888
La
127
184
LKKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILEVLRST
Links
Other
La
family RBPs
Other
Xenopus laevis
RBPs
85 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAI30197
Xenopus laevis
AAI30197
N
0.983
Ame_R012731
Ailuropoda melanoleuca
Ame_R012731
N
0.707
ENSPPYG00000002035
Pongo pygmaeus
ENSPPYG00000002035
N
0.724
ENSTGUG00000013982
Taeniopygia guttata
ENSTGUG00000013982
N
0.724
LARP4
Monodelphis domestica
ENSMODG00000004844
N
0.914
LARP4
Ochotona princeps
ENSOPRG00000004592
N
0.879
LARP4
Tupaia belangeri
ENSTBEG00000005167
N
0.897
larp4
Xenopus tropicalis
ENSXETG00000007283
N
0.966
LARP4
Choloepus hoffmanni
ENSCHOG00000010490
N
0.862
LARP4B
Tetraodon nigroviridis
ENSTNIG00000007991
N
0.000
LARP4B
Ochotona princeps
ENSOPRG00000003300
N
0.724
larp4b
Xenopus tropicalis
ENSXETG00000016882
N
0.707
LARP4B
Vicugna pacos
ENSVPAG00000000128
N
0.000
LARP4B
Oryzias latipes
ENSORLG00000006080
N
0.000
LARP4B
Myotis lucifugus
ENSMLUG00000005880
N
0.724
LARP4B
Pan troglodytes
ENSPTRG00000002235
N
0.724
LARP4B
Sorex araneus
ENSSARG00000001243
N
0.741
LARP4B
Sus scrofa
ENSSSCG00000011162
N
0.741
LARP4B
Spermophilus tridecemlineatus
ENSSTOG00000000587
N
0.707
LARP4B
Tursiops truncatus
ENSTTRG00000011151
N
0.724
LARP4B
Tarsius syrichta
ENSTSYG00000002568
N
0.724
LARP4B
Tetraodon nigroviridis
ENSTNIG00000004571
N
0.000
LARP4B
Oryctolagus cuniculus
ENSOCUG00000004950
N
0.712
LARP4B
Ornithorhynchus anatinus
ENSOANG00000006100
N
0.712
Larp4b
Mus musculus
ENSMUSG00000033499
N
0.724
LARP4B
Erinaceus europaeus
ENSEEUG00000008391
N
0.741
LARP4B
Dasypus novemcinctus
ENSDNOG00000002462
N
0.724
LARP4B
Danio rerio
ENSDARG00000062146
N
0.000
LARP4B
Cavia porcellus
ENSCPOG00000009375
N
0.729
LARP4B
Choloepus hoffmanni
ENSCHOG00000007831
N
0.707
LARP4B
Canis familiaris
ENSCAFG00000005546
N
0.707
LARP4B
Bos taurus
ENSBTAG00000013899
N
0.741
LARP4B
Anolis carolinensis
ENSACAG00000002858
N
0.707
LARP4B
Echinops telfairi
ENSETEG00000011249
N
0.724
LARP4B
Homo sapiens
ENSG00000107929
N
0.724
LARP4B
Gasterosteus aculeatus
ENSGACG00000017535
N
0.000
LARP4B
Monodelphis domestica
ENSMODG00000005957
N
0.724
LARP4B
Macaca mulatta
ENSMMUG00000005279
N
0.724
LARP4B
Meleagris gallopavo
ENSMGAG00000005472
N
0.724
LARP4B
Macropus eugenii
ENSMEUG00000013114
N
0.000
LARP4B
Loxodonta africana
ENSLAFG00000015334
N
0.724
LARP4B
Gorilla gorilla
ENSGGOG00000003572
N
0.712
Larp5
Rattus norvegicus
ENSRNOG00000015888
N
0.724
LARP5
Gallus gallus
ENSGALG00000006672
N
0.724
LARP5
Taeniopygia guttata
ENSTGUG00000000811
N
0.724
LOC100057616
Equus caballus
ENSECAG00000024040
N
0.741