CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUP153
(
Takifugu rubripes
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSTRUG00000010163
T26858_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000025584
RanBP ZF
672
698
GWTCDACLVQNKPSDKKCVCCMTPQPN
ENSTRUP00000025584
RanBP ZF
736
765
PVGTWDCDTCLVRNKADAVKCVACETAKPG
ENSTRUP00000025584
RanBP ZF
805
834
AEGAWECDTCMVENKAEATKCVACMNTKPE
ENSTRUP00000025584
RanBP ZF
864
893
PEGSWDCDVCLVQNKAADVECVACQTPKPG
ENSTRUP00000025585
RanBP ZF
661
687
GWTCDACLVQNKPSDKKCVCCMTPQPN
ENSTRUP00000025585
RanBP ZF
725
754
PVGTWDCDTCLVRNKADAVKCVACETAKPG
ENSTRUP00000025585
RanBP ZF
794
823
AEGAWECDTCMVENKAEATKCVACMNTKPE
ENSTRUP00000025585
RanBP ZF
853
882
PEGSWDCDVCLVQNKAADVECVACQTPKPG
ENSTRUP00000025586
RanBP ZF
618
644
GWTCDACLVQNKPSDKKCVCCMTPQPN
ENSTRUP00000025586
RanBP ZF
682
711
PVGTWDCDTCLVRNKADAVKCVACETAKPG
ENSTRUP00000025586
RanBP ZF
751
780
AEGAWECDTCMVENKAEATKCVACMNTKPE
ENSTRUP00000025586
RanBP ZF
810
839
PEGSWDCDVCLVQNKAADVECVACQTPKPG
ENSTRUP00000025587
RanBP ZF
644
670
GWTCDACLVQNKPSDKKCVCCMTPQPN
ENSTRUP00000025587
RanBP ZF
708
737
PVGTWDCDTCLVRNKADAVKCVACETAKPG
ENSTRUP00000025587
RanBP ZF
777
806
AEGAWECDTCMVENKAEATKCVACMNTKPE
ENSTRUP00000025587
RanBP ZF
836
865
PEGSWDCDVCLVQNKAADVECVACQTPKPG
Links
Other
RanBP ZF
family RBPs
Other
Takifugu rubripes
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A5D7H7_BOVIN
Bos taurus
ENSBTAG00000010235
N
0.000
C14orf21
Pan troglodytes
ENSPTRG00000033813
N
0.000
C14orf21
Procavia capensis
ENSPCAG00000002545
N
0.000
C14orf21
Oryctolagus cuniculus
ENSOCUG00000002948
N
0.000
C14orf21
Loxodonta africana
ENSLAFG00000028287
N
0.000
C14orf21
Cavia porcellus
ENSCPOG00000014406
N
0.000
C14orf21
Sus scrofa
ENSSSCG00000001990
N
0.000
ENSPPYG00000005698
Pongo pygmaeus
ENSPPYG00000005698
N
0.000
LOC100054451
Equus caballus
ENSECAG00000024171
N
0.000
LOC100396802
Callithrix jacchus
ENSCJAG00000006675
N
0.000
RGD1308396
Rattus norvegicus
ENSRNOG00000020321
N
0.000