nasonia_NCBI_hmm460663 (Nasonia vitripennis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 nasonia_NCBI_hmm460663 T32246_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM8A
M054_0.6 		Homo sapiens RYGCGCB RNAcompete
Ray et al.(2013)
RNCMPT00056 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm460663 RRM 75 145

Links

Other RRM family RBPs
Other Nasonia vitripennis RBPs

68 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL006748 Aedes aegypti AAEL006748 N 0.789
AAG27092 Xenopus laevis AAG27092 I 0.746
AAH56659 Xenopus laevis AAH56659 I 0.746
AAH73361 Xenopus laevis AAH73361 I 0.746
AGAP006365 Anopheles gambiae AGAP006365 I 0.775
amel4_ncbi_hmm2170 Apis mellifera amel4_ncbi_hmm2170 I 0.915
Ame_R013073 Ailuropoda melanoleuca Ame_R013073 I 0.704
B020018G12Rik Mus musculus ENSMUSG00000078184 I 0.704
B5FZD1_TAEGU Taeniopygia guttata ENSTGUG00000004447 I 0.718
CBN21335 Caenorhabditis brenneri CBN21335 N 0.704
CJA17011 Caenorhabditis japonica CJA17011 I 0.704
CPIJ007339 Culex quinquefasciatus CPIJ007339 I 0.803
CpipJ_CPIJ007339 Culex pipiens CpipJ_CPIJ007339 I 0.803
DGIL_AUG5s13034g4t1 Acyrtosiphon pisum DGIL_AUG5s13034g4t1 I 0.746
DGIL_AUG5s25g7t1 Acyrtosiphon pisum DGIL_AUG5s25g7t1 I 0.746
ENSETEG00000017932 Echinops telfairi ENSETEG00000017932 I 0.704
ENSLAFG00000021886 Loxodonta africana ENSLAFG00000021886 I 0.704
ENSPPYG00000000929 Pongo pygmaeus ENSPPYG00000000929 I 0.704
estExt_fgenesh1_pg.C_1530030 Capitella teleta estExt_fgenesh1_pg.C_1530030 I 0.732
estExt_fgenesh2_pg.C_4600002 Branchiostoma floridae estExt_fgenesh2_pg.C_4600002 I 0.831
estExt_Genewise1.C_210127 Daphnia pulex estExt_Genewise1.C_210127 I 0.803
EuGene.0000060244 Micromonas pusilla EuGene.0000060244 N 0.775
e_gw.27.177.1 Nematostella vectensis e_gw.27.177.1 N 0.746
e_gw.589.3.1 Branchiostoma floridae e_gw.589.3.1 I 0.831
e_gw1.136.78.1 Physcomitrella patens e_gw1.136.78.1 N 0.704
e_gw1.53.304.1 Lottia gigantea e_gw1.53.304.1 I 0.845
GA21317-RA Drosophila pseudoobscura FBgn0081305 N 0.718
GD10630 Drosophila simulans FBgn0182397 N 0.718
GE19253 Drosophila yakuba FBgn0236606 N 0.718
GF11955 Drosophila ananassae FBgn0088994 N 0.718
GG23412 Drosophila erecta FBgn0115559 N 0.718
GI19803 Drosophila mojavensis FBgn0142540 I 0.704
GK23248 Drosophila willistoni FBgn0225210 N 0.718
GL17620 Drosophila persimilis FBgn0155223 N 0.718
GM21093 Drosophila sechellia FBgn0175974 N 0.718
gw.10.199.1 Nematostella vectensis gw.10.199.1 N 0.746
gw.617.10.1 Nematostella vectensis gw.617.10.1 N 0.746
LOC100399389 Callithrix jacchus ENSCJAG00000002209 I 0.704
PHUM390470 Pediculus humanus PHUM390470 N 0.761
Q6DTK7_HORSE Equus caballus ENSECAG00000022024 I 0.704
Q6PH90 Xenopus laevis Q6PH90 I 0.746
Q8JJC6_ORYLA Oryzias latipes ENSORLG00000016263 I 0.761
Q9DF42 Xenopus laevis Q9DF42 I 0.746
RBM8A Macaca mulatta ENSMMUG00000016051 I 0.704
RBM8A Macropus eugenii ENSMEUG00000016058 I 0.732
RBM8A Gorilla gorilla ENSGGOG00000005422 I 0.704
RBM8A Sus scrofa ENSSSCG00000006684 I 0.704
RBM8A Gasterosteus aculeatus ENSGACG00000013157 I 0.746
RBM8A Oryctolagus cuniculus ENSOCUG00000025693 I 0.704
RBM8A Homo sapiens ENSG00000131795 D 0.704
RBM8A Felis catus ENSFCAG00000005412 I 0.704
rbm8a Danio rerio ENSDARG00000016516 I 0.746
RBM8A Cavia porcellus ENSCPOG00000022453 I 0.704
RBM8A Canis familiaris ENSCAFG00000023172 I 0.704
RBM8A Monodelphis domestica ENSMODG00000018752 I 0.704
Rbm8a Mus musculus ENSMUSG00000038374 I 0.704
RBM8A Tursiops truncatus ENSTTRG00000009081 I 0.704
RBM8A Takifugu rubripes ENSTRUG00000013173 I 0.746
RBM8A Tetraodon nigroviridis ENSTNIG00000006869 I 0.746
RBM8A Spermophilus tridecemlineatus ENSSTOG00000013917 I 0.704
RBM8A Sorex araneus ENSSARG00000013289 I 0.704
Rbm8a Rattus norvegicus ENSRNOG00000021215 I 0.704
RBM8A Pteropus vampyrus ENSPVAG00000014471 I 0.704
RBM8A Pan troglodytes ENSPTRG00000001201 I 0.704
RBM8A Otolemur garnettii ENSOGAG00000000202 I 0.704
RBM8A_BOVIN Bos taurus ENSBTAG00000008369 I 0.704
rnp-4 Caenorhabditis elegans R07E5.14 N 0.704
tsu Drosophila melanogaster FBgn0033378 N 0.718