CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM23
(
Felis catus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSFCAG00000006632
T37081_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000006163
RRM
169
237
VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPI
ENSFCAP00000006163
RRM
266
317
LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITLAGRAW
Links
Other
RRM
family RBPs
Other
Felis catus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAB26047
Xenopus laevis
AAB26047
I
0.000
AAH44711
Xenopus laevis
AAH44711
I
0.000
Ame_R002812
Ailuropoda melanoleuca
Ame_R002812
I
0.000
D3ZJL5_RAT
Rattus norvegicus
ENSRNOG00000029014
I
0.000
ENSCPOG00000005024
Cavia porcellus
ENSCPOG00000005024
I
0.000
ENSMMUG00000018871
Macaca mulatta
ENSMMUG00000018871
I
0.000
ENSMODG00000008402
Monodelphis domestica
ENSMODG00000008402
I
0.000
ENSOCUG00000025925
Oryctolagus cuniculus
ENSOCUG00000025925
I
0.000
ENSPPYG00000013626
Pongo pygmaeus
ENSPPYG00000013626
I
0.000
ENSPPYG00000019327
Pongo pygmaeus
ENSPPYG00000019327
I
0.000
ENSRNOG00000013016
Rattus norvegicus
ENSRNOG00000013016
I
0.000
ENSTTRG00000004906
Tursiops truncatus
ENSTTRG00000004906
I
0.000
Gm7964
Mus musculus
ENSMUSG00000063902
I
0.000
HNRNPK
Procavia capensis
ENSPCAG00000016196
I
0.000
HNRNPK
Oryzias latipes
ENSORLG00000005161
I
0.000
HNRNPK
Pan troglodytes
ENSPTRG00000021061
I
0.000
HNRNPK
Oryzias latipes
ENSORLG00000004704
I
0.000
HNRNPK
Pteropus vampyrus
ENSPVAG00000009078
I
0.000
HNRNPK
Tarsius syrichta
ENSTSYG00000001196
I
0.000
Hnrnpk
Rattus norvegicus
ENSRNOG00000019113
I
0.000
hnrnpk
Xenopus tropicalis
ENSXETG00000011722
I
0.000
HNRNPK
Vicugna pacos
ENSVPAG00000001865
N
0.000
HNRNPK
Tursiops truncatus
ENSTTRG00000016693
I
0.000
HNRNPK
Gasterosteus aculeatus
ENSGACG00000007581
I
0.000
HNRNPK
Takifugu rubripes
ENSTRUG00000010659
I
0.000
HNRNPK
Takifugu rubripes
ENSTRUG00000000535
I
0.000
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000007554
I
0.000
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000006005
I
0.000
HNRNPK
Taeniopygia guttata
ENSTGUG00000003138
I
0.000
HNRNPK
Tupaia belangeri
ENSTBEG00000001289
I
0.000
HNRNPK
Ochotona princeps
ENSOPRG00000015723
I
0.000
HNRNPK
Otolemur garnettii
ENSOGAG00000007478
I
0.000
HNRNPK
Anolis carolinensis
ENSACAG00000001479
I
0.000
hnRNPK
Homo sapiens
ENSG00000165119
D
0.000
HNRNPK
Felis catus
ENSFCAG00000014862
I
0.000
HNRNPK
Echinops telfairi
ENSETEG00000016294
I
0.000
HNRNPK
Erinaceus europaeus
ENSEEUG00000014624
I
0.000
HNRNPK
Equus caballus
ENSECAG00000025104
I
0.000
hnrnpk
Danio rerio
ENSDARG00000018914
I
0.000
HNRNPK
Callithrix jacchus
ENSCJAG00000003750
I
0.000
HNRNPK
Choloepus hoffmanni
ENSCHOG00000010832
I
0.000
HNRNPK
Gallus gallus
ENSGALG00000012591
I
0.000
Hnrnpk
Mus musculus
ENSMUSG00000021546
I
0.000
HNRNPK
Gorilla gorilla
ENSGGOG00000015500
I
0.000
HNRNPK
Loxodonta africana
ENSLAFG00000026567
I
0.000
HNRNPK
Macropus eugenii
ENSMEUG00000006975
I
0.000
HNRNPK
Microcebus murinus
ENSMICG00000015780
N
0.000
HNRNPK
Monodelphis domestica
ENSMODG00000018992
I
0.000
HNRNPK
Myotis lucifugus
ENSMLUG00000005871
I
0.000
HNRNPK
Ornithorhynchus anatinus
ENSOANG00000014612
I
0.000
hnrpkl
Danio rerio
ENSDARG00000007034
I
0.000
HNRPK_BOVIN
Bos taurus
ENSBTAG00000021131
I
0.000
HNRPK_CHICK
Gallus gallus
ENSGALG00000014366
I
0.000
HNRPK_RABIT
Oryctolagus cuniculus
ENSOCUG00000010364
I
0.000
XM_533511.2
Canis familiaris
ENSCAFG00000001399
I
0.000
XM_855974.1
Canis familiaris
ENSCAFG00000017503
I
0.000