CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPH3
(
Spermophilus tridecemlineatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSTOG00000011676
T41637_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000010475
RRM
18
87
VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIE
ENSSTOP00000010475
RRM
197
264
VHMRGLPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIE
Links
Other
RRM
family RBPs
Other
Spermophilus tridecemlineatus
RBPs
48 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FUBP1
Dasypus novemcinctus
ENSDNOG00000013200
N
0.000
FUBP1
Echinops telfairi
ENSETEG00000000948
N
0.000
FUBP3
Erinaceus europaeus
ENSEEUG00000000550
N
0.000
FUBP3
Homo sapiens
ENSG00000107164
N
0.000
FUBP3
Macaca mulatta
ENSMMUG00000008249
N
0.000
FUBP3
Pan troglodytes
ENSPTRG00000021474
N
0.000