CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSTBEG00000002499
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000002499
T41698_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000002142
RRM
30
99
IFVGGIKEDTEEHHLREYFEQYGKIKVIEIMTDHGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
augustus-scaffold_1.g441
Schizophyllum commune
augustus-scaffold_1.g441
N
0.000
CC1G_06273
Coprinopsis cinerea
CC1G_06273
N
0.000
EDP41651.1
Malassezia globosa
EDP41651.1
N
0.000
estExt_fgenesh2_kg.C_71062
Serpula lacrymans
estExt_fgenesh2_kg.C_71062
N
0.000
estExt_fgenesh2_pg.C_120136
Selaginella moellendorfii
estExt_fgenesh2_pg.C_120136
N
0.000
estExt_Genewise1Plus.C_30445
Agaricus bisporus
estExt_Genewise1Plus.C_30445
N
0.000
e_gw1.1.503.1
Phycomyces blakesleeanus
e_gw1.1.503.1
N
0.000
e_gw1.10.335.1
Mucor circinelloides
e_gw1.10.335.1
N
0.000
e_gw1.35.197.1
Physcomitrella patens
e_gw1.35.197.1
N
0.000
fgenesh1_pg.C_scaffold_4000265
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000265
N
0.000
fgenesh1_pm.00609_#_590
Aspergillus carbonarius
fgenesh1_pm.00609_#_590
N
0.000
Glyma02g29190.1
Glycine max
Glyma02g29190.1
N
0.000
Glyma09g17080.1
Glycine max
Glyma09g17080.1
N
0.000
gw1.198.122.1
Physcomitrella patens
gw1.198.122.1
N
0.000
Medtr1g137330
Medicago truncatula
Medtr1g137330
N
0.000
MKI67IP
Microcebus murinus
ENSMICG00000015787
N
0.000
PMAA_027560
Penicillium marneffei
PMAA_027560
N
0.000
SPCC1827.05c
Schizosaccharomyces pombe
SPCC1827.05c
N
0.000
UM03939
Ustilago maydis
UM03939
N
0.000