GA14206-RA (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0074235 T43133_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0281839 RRM 57 126
FBpp0281839 RRM 137 206

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL005049 Aedes aegypti AAEL005049 N 0.743
AAEL005515 Aedes aegypti AAEL005515 N 0.829
AGAP000399 Anopheles gambiae AGAP000399 N 0.800
AGAP006668 Anopheles gambiae AGAP006668 N 0.786
amel4_ncbi_hmm13002 Apis mellifera amel4_ncbi_hmm13002 N 0.743
amel4_ncbi_hmm2459 Apis mellifera amel4_ncbi_hmm2459 N 0.786
BGIBMGA013464 Bombyx mori BGIBMGA013464 N 0.800
CPIJ011536 Culex quinquefasciatus CPIJ011536 N 0.807
CpipJ_CPIJ011536 Culex pipiens CpipJ_CPIJ011536 N 0.807
estExt_fgenesh1_pm.C_1020006 Daphnia pulex estExt_fgenesh1_pm.C_1020006 N 0.721
GD20486 Drosophila simulans FBgn0191957 N 0.943
GE24428 Drosophila yakuba FBgn0241545 N 0.950
GF17370 Drosophila ananassae FBgn0094388 N 0.950
GG17035 Drosophila erecta FBgn0109263 N 0.964
GH19060 Drosophila grimshawi FBgn0126527 N 0.950
GI10695 Drosophila mojavensis FBgn0133459 N 0.971
GJ23113 Drosophila virilis FBgn0210215 N 0.964
GK13337 Drosophila willistoni FBgn0215346 N 0.950
GL23974 Drosophila persimilis FBgn0161564 N 0.943
GM25920 Drosophila sechellia FBgn0180776 N 0.950
nasonia_NCBI_hmm138813 Nasonia vitripennis nasonia_NCBI_hmm138813 N 0.771
PHUM596900 Pediculus humanus PHUM596900 N 0.714
sqd Drosophila melanogaster FBgn0086897 N 0.964