estExt_Genewise1.C_sca_90322 (Lottia gigantea)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_sca_90322 T51333_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_sca_90322 RRM 40 108
estExt_Genewise1.C_sca_90322 RRM 137 207
estExt_Genewise1.C_sca_90322 RRM 321 378

Links

Other RRM family RBPs
Other Lottia gigantea RBPs

63 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_13674 Botrytis cinerea BC1G_13674 N 0.000
CHGG_02847 Chaetomium globosum CHGG_02847 N 0.000
estExt_fgenesh1_pm.C_190049 Neurospora tetrasperma estExt_fgenesh1_pm.C_190049 N 0.000
estExt_Genewise1.C_51123 Trichoderma virens estExt_Genewise1.C_51123 N 0.000
estExt_Genewise1Plus.C_21572 Neurospora discreta estExt_Genewise1Plus.C_21572 N 0.000
e_gw1.12.283.1 Trichoderma reesei e_gw1.12.283.1 N 0.000
fgenesh2_pm.1_#_1569 Thielavia terrestris fgenesh2_pm.1_#_1569 N 0.000
FGSG_01220 Fusarium graminearum FGSG_01220 N 0.000
FOXG_00169 Fusarium oxysporum FOXG_00169 N 0.000
FVEG_01347 Fusarium verticillioides FVEG_01347 N 0.000
GLRG_01598 Colletotrichum graminicola GLRG_01598 N 0.000
gw1.2.3184.1 Myceliophthora thermophila gw1.2.3184.1 N 0.000
NCU02661 Neurospora crassa NCU02661 N 0.000
SS1G_07770 Sclerotinia sclerotiorum SS1G_07770 N 0.000
VDAG_04392 Verticillium dahliae VDAG_04392 N 0.000
VDBG_04852 Verticillium albo atrum VDBG_04852 N 0.000