PMAA_042630 (Penicillium marneffei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PMAA_042630 T58276_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_042630.t1 RRM 113 185
PMAA_042630.t1 RRM 277 332
PMAA_042630.t2 RRM 113 185
PMAA_042630.t2 RRM 277 321
PMAA_042630.t3 RRM 113 185

Links

Other RRM family RBPs
Other Penicillium marneffei RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_024590 Aspergillus clavatus CADACLAG00002524 N 0.823
AFLA_068630 Aspergillus flavus CADAFLAG00008287 N 0.792
AFUA_1G10920 Aspergillus fumigatus CADAFUAG00007692 N 0.815
An08g03180 Aspergillus niger CADANGAG00006637 N 0.868
ANIA_01188 Aspergillus nidulans CADANIAG00001437 N 0.800
AO090038000318 Aspergillus oryzae CADAORAG00009105 N 0.792
ARB_02854 Arthroderma benhamiae ARB_02854 N 0.754
ATEG_00286 Aspergillus terreus CADATEAG00009538 N 0.777
BDBG_00241 Blastomyces dermatitidis BDBG_00241 N 0.731
CIMG_06929 Coccidioides immitis CIMG_06929 N 0.829
CPSG_09587 Coccidioides posadasii CPSG_09587 N 0.829
e_gw1.00083.460.1 Aspergillus carbonarius e_gw1.00083.460.1 N 0.808
HCAG_01782 Histoplasma capsulatum HCAG_01782 N 0.731
MCYG_01582 Microsporum canis MCYG_01582 N 0.746
MGYG_04491 Microsporum gypseum MGYG_04491 N 0.746
NFIA_014720 Neosartorya fischeri CADNFIAG00001794 N 0.815
PABG_00485 Paracoccidioides brasiliensis PABG_00485 N 0.738
TEQG_02286 Trichophyton equinum TEQG_02286 N 0.757
TERG_07903 Trichophyton rubrum TERG_07903 N 0.746
TESG_05610 Trichophyton tonsurans TESG_05610 N 0.746
TRV_05547 Trichophyton verrucosum TRV_05547 N 0.723
UREG_05919 Uncinocarpus reesii UREG_05919 N 0.800