MBNL2 (Sus scrofa)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSSSCG00000009505 T03378_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.882
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.882
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000010151 CCCH ZF 16 40
ENSSSCP00000010151 CCCH ZF 57 72
ENSSSCP00000010151 CCCH ZF 177 203
ENSSSCP00000010151 CCCH ZF 215 237

Links

Other CCCH ZF family RBPs
Other Sus scrofa RBPs

111 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL010018 Aedes aegypti AAEL010018 N 0.000
AGAP004937 Anopheles gambiae AGAP004937 N 0.000
GF10107 Drosophila ananassae FBgn0087148 N 0.000
GG15082 Drosophila erecta FBgn0107336 N 0.000
GH16406 Drosophila grimshawi FBgn0123877 N 0.000
Unr Drosophila melanogaster FBgn0035895 N 0.000
GI12487 Drosophila mojavensis FBgn0135244 N 0.000
GM24938 Drosophila sechellia FBgn0179800 N 0.000
GJ12391 Drosophila virilis FBgn0199634 N 0.000
GK17751 Drosophila willistoni FBgn0219750 N 0.000
GE21305 Drosophila yakuba FBgn0238572 N 0.000