ENSTRUG00000017351 (Takifugu rubripes)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSTRUG00000017351 T03549_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.860
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.860
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000044451 CCCH ZF 16 40
ENSTRUP00000044451 CCCH ZF 57 72
ENSTRUP00000044451 CCCH ZF 177 203
ENSTRUP00000044451 CCCH ZF 214 237
ENSTRUP00000044452 CCCH ZF 16 40
ENSTRUP00000044452 CCCH ZF 57 72
ENSTRUP00000044452 CCCH ZF 177 203
ENSTRUP00000044452 CCCH ZF 214 237
ENSTRUP00000044453 CCCH ZF 16 40
ENSTRUP00000044453 CCCH ZF 57 72
ENSTRUP00000044453 CCCH ZF 177 203
ENSTRUP00000044453 CCCH ZF 214 237
ENSTRUP00000044454 CCCH ZF 16 40
ENSTRUP00000044454 CCCH ZF 57 72
ENSTRUP00000044454 CCCH ZF 111 136
ENSTRUP00000044454 CCCH ZF 147 170
ENSTRUP00000044455 CCCH ZF 16 40
ENSTRUP00000044455 CCCH ZF 57 72
ENSTRUP00000044455 CCCH ZF 179 205
ENSTRUP00000044455 CCCH ZF 216 239

Links

Other CCCH ZF family RBPs
Other Takifugu rubripes RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm606214 Nasonia vitripennis nasonia_NCBI_hmm606214 N 0.000