CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H15
(
Vicugna pacos
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSVPAG00000006980
T03621_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000006489
CCCH ZF
78
103
PKSVVCAFFKQGQCTKGDKCKFSHDL
Links
Other
CCCH ZF
family RBPs
Other
Vicugna pacos
RBPs
144 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_02854
Arthroderma benhamiae
ARB_02854
N
0.000
e_gw1.00083.460.1
Aspergillus carbonarius
e_gw1.00083.460.1
N
0.000
ACLA_024590
Aspergillus clavatus
CADACLAG00002524
N
0.000
AFLA_068630
Aspergillus flavus
CADAFLAG00008287
N
0.000
AFUA_1G10920
Aspergillus fumigatus
CADAFUAG00007692
N
0.000
ANIA_01188
Aspergillus nidulans
CADANIAG00001437
N
0.000
An08g03180
Aspergillus niger
CADANGAG00006637
N
0.000
AO090038000318
Aspergillus oryzae
CADAORAG00009105
N
0.000
ATEG_00286
Aspergillus terreus
CADATEAG00009538
N
0.000
BDBG_00241
Blastomyces dermatitidis
BDBG_00241
N
0.000
CIMG_06929
Coccidioides immitis
CIMG_06929
N
0.000
CPSG_09587
Coccidioides posadasii
CPSG_09587
N
0.000
HCAG_01782
Histoplasma capsulatum
HCAG_01782
N
0.000
MCYG_01582
Microsporum canis
MCYG_01582
N
0.000
MGYG_04491
Microsporum gypseum
MGYG_04491
N
0.000
NFIA_014720
Neosartorya fischeri
CADNFIAG00001794
N
0.000
PABG_00485
Paracoccidioides brasiliensis
PABG_00485
N
0.000
PMAA_042630
Penicillium marneffei
PMAA_042630
N
0.000
TEQG_02286
Trichophyton equinum
TEQG_02286
N
0.000
TERG_07903
Trichophyton rubrum
TERG_07903
N
0.000
TESG_05610
Trichophyton tonsurans
TESG_05610
N
0.000
TRV_05547
Trichophyton verrucosum
TRV_05547
N
0.000
UREG_05919
Uncinocarpus reesii
UREG_05919
N
0.000