amel4_ncbi_hmm42637 (Apis mellifera)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		amel4_ncbi_hmm42637 T07136_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF7
M353_0.6 		Homo sapiens ACGAGAGAY SELEX
Cook et al.(2011)
954_10094314 		0.774
SRSF7
M331_0.6 		Homo sapiens AGACKACGAY SELEX
Cook et al.(2011)
790_10094314 		0.774
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm42637 RRM 13 78
amel4_ncbi_hmm42637 CCHC ZF 105 122

Links

Other CCHC ZF,RRM family RBPs
Other Apis mellifera RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s7527g2t1 Acyrtosiphon pisum DGIL_AUG5s7527g2t1 I 0.845
AAEL017082 Aedes aegypti AAEL017082 I 0.833
Ame_R012465 Ailuropoda melanoleuca Ame_R012465 I 0.786
SRSF7 Anolis carolinensis ENSACAG00000006082 I 0.774
BGIBMGA010396 Bombyx mori BGIBMGA010396 I 0.857
SFRS7_BOVIN Bos taurus ENSBTAG00000014891 I 0.774
LOC100385878 Callithrix jacchus ENSCJAG00000015185 I 0.786
ENSCAFG00000006272 Canis familiaris ENSCAFG00000006272 I 0.774
estExt_Genewise1.C_1590063 Capitella teleta estExt_Genewise1.C_1590063 I 0.702
SRSF7 Cavia porcellus ENSCPOG00000011785 I 0.774
ENSCHOG00000002390 Choloepus hoffmanni ENSCHOG00000002390 I 0.726
CpipJ_CPIJ013237 Culex pipiens CpipJ_CPIJ013237 I 0.857
CPIJ013237 Culex quinquefasciatus CPIJ013237 I 0.857
SRSF7 Danio rerio ENSDARG00000035325 I 0.762
ENSDARG00000054296 Danio rerio ENSDARG00000054296 I 0.750
SRSF7 Dasypus novemcinctus ENSDNOG00000007821 I 0.774
Srsf7 Dipodomys ordii ENSDORG00000008616 I 0.774
LOC100054033 Equus caballus ENSECAG00000008664 I 0.774
SRSF7 Erinaceus europaeus ENSEEUG00000014487 I 0.774
Q5ZMI0_CHICK Gallus gallus ENSGALG00000013819 I 0.762
ENSGALG00000013825 Gallus gallus ENSGALG00000013825 I 0.000
SRSF7 Gasterosteus aculeatus ENSGACG00000012311 I 0.762
SRSF7 Gorilla gorilla ENSGGOG00000014620 I 0.774
SRSF7 Homo sapiens ENSG00000115875 D 0.786
SRSF7 Loxodonta africana ENSLAFG00000005666 I 0.786
SRSF7 Macaca mulatta ENSMMUG00000011025 I 0.786
ENSMEUG00000000773 Macropus eugenii ENSMEUG00000000773 I 0.750
ENSMEUG00000016459 Macropus eugenii ENSMEUG00000016459 I 0.774
SRSF7 Meleagris gallopavo ENSMGAG00000007415 I 0.774
ENSMODG00000023693 Monodelphis domestica ENSMODG00000023693 I 0.750
ENSMODG00000008669 Monodelphis domestica ENSMODG00000008669 I 0.786
Srsf7 Mus musculus ENSMUSG00000024097 I 0.774
SRSF7 Myotis lucifugus ENSMLUG00000015692 I 0.774
SRSF7 Ochotona princeps ENSOPRG00000010234 I 0.774
SRSF7 Ornithorhynchus anatinus ENSOANG00000004405 I 0.786
SRSF7 Oryctolagus cuniculus ENSOCUG00000004087 I 0.774
SRSF7 Oryzias latipes ENSORLG00000000746 I 0.750
SRSF7 Otolemur garnettii ENSOGAG00000010169 I 0.774
SRSF7 Pan troglodytes ENSPTRG00000011851 I 0.786
PHUM241330 Pediculus humanus PHUM241330 I 0.857
ENSPPYG00000012480 Pongo pygmaeus ENSPPYG00000012480 I 0.774
SRSF7 Procavia capensis ENSPCAG00000011348 I 0.774
SRSF7 Pteropus vampyrus ENSPVAG00000012076 I 0.774
Sfrs7 Rattus norvegicus ENSRNOG00000027360 I 0.774
ENSRNOG00000033319 Rattus norvegicus ENSRNOG00000033319 I 0.702
SRSF7 Sus scrofa ENSSSCG00000008484 I 0.774
SFRS7 Taeniopygia guttata ENSTGUG00000002080 I 0.762
B5FZ53_TAEGU Taeniopygia guttata ENSTGUG00000002095 I 0.762
SRSF7 Takifugu rubripes ENSTRUG00000010529 I 0.762
SRSF7 Tarsius syrichta ENSTSYG00000012273 I 0.774
SRSF7 Tetraodon nigroviridis ENSTNIG00000014279 I 0.762
SRSF7 Tupaia belangeri ENSTBEG00000004604 I 0.774
SRSF7 Tursiops truncatus ENSTTRG00000014324 I 0.702
SRSF7 Vicugna pacos ENSVPAG00000003316 I 0.774
AAH77185 Xenopus laevis AAH77185 I 0.798
AAH77393 Xenopus laevis AAH77393 I 0.798
srsf7 Xenopus tropicalis ENSXETG00000025300 I 0.798