ENSCHOG00000002390 (Choloepus hoffmanni)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSCHOG00000002390 T07207_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF7
M353_0.6 		Homo sapiens ACGAGAGAY SELEX
Cook et al.(2011)
954_10094314 		0.904
SRSF7
M331_0.6 		Homo sapiens AGACKACGAY SELEX
Cook et al.(2011)
790_10094314 		0.904
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000002115 RRM 13 76
ENSCHOP00000002115 CCHC ZF 94 110

Links

Other CCHC ZF,RRM family RBPs
Other Choloepus hoffmanni RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF7 Procavia capensis ENSPCAG00000011348 I 0.904
LOC100385878 Callithrix jacchus ENSCJAG00000015185 I 0.904
SRSF7 Pan troglodytes ENSPTRG00000011851 I 0.904
SRSF7 Ochotona princeps ENSOPRG00000010234 I 0.904
SRSF7 Otolemur garnettii ENSOGAG00000010169 I 0.904
Srsf7 Mus musculus ENSMUSG00000024097 I 0.904
SRSF7 Ornithorhynchus anatinus ENSOANG00000004405 I 0.904
SRSF7 Oryctolagus cuniculus ENSOCUG00000004087 I 0.904
SRSF7 Pteropus vampyrus ENSPVAG00000012076 I 0.904
Sfrs7 Rattus norvegicus ENSRNOG00000027360 I 0.904
SRSF7 Anolis carolinensis ENSACAG00000006082 I 0.904
SFRS7_BOVIN Bos taurus ENSBTAG00000014891 I 0.904
ENSCAFG00000006272 Canis familiaris ENSCAFG00000006272 I 0.904
SRSF7 Vicugna pacos ENSVPAG00000003316 I 0.904
SRSF7 Tarsius syrichta ENSTSYG00000012273 I 0.904
SRSF7 Sus scrofa ENSSSCG00000008484 I 0.904
SRSF7 Tupaia belangeri ENSTBEG00000004604 I 0.904
ENSMODG00000008669 Monodelphis domestica ENSMODG00000008669 I 0.904
ENSPPYG00000012480 Pongo pygmaeus ENSPPYG00000012480 I 0.904
Srsf7 Dipodomys ordii ENSDORG00000008616 I 0.904
SRSF7 Gorilla gorilla ENSGGOG00000014620 I 0.904
SRSF7 Macaca mulatta ENSMMUG00000011025 I 0.904
LOC100054033 Equus caballus ENSECAG00000008664 I 0.904
SRSF7 Homo sapiens ENSG00000115875 D 0.904
SRSF7 Dasypus novemcinctus ENSDNOG00000007821 I 0.904
SRSF7 Loxodonta africana ENSLAFG00000005666 I 0.904
SRSF7 Myotis lucifugus ENSMLUG00000015692 I 0.904
SRSF7 Cavia porcellus ENSCPOG00000011785 I 0.904
SRSF7 Erinaceus europaeus ENSEEUG00000014487 I 0.904
SRSF7 Meleagris gallopavo ENSMGAG00000007415 I 0.904
ENSMEUG00000016459 Macropus eugenii ENSMEUG00000016459 I 0.904
Ame_R012465 Ailuropoda melanoleuca Ame_R012465 I 0.893
SFRS7 Taeniopygia guttata ENSTGUG00000002080 I 0.892
B5FZ53_TAEGU Taeniopygia guttata ENSTGUG00000002095 I 0.892
Q5ZMI0_CHICK Gallus gallus ENSGALG00000013819 I 0.892
ENSMODG00000023693 Monodelphis domestica ENSMODG00000023693 I 0.880
ENSMEUG00000000773 Macropus eugenii ENSMEUG00000000773 I 0.880
AAH77185 Xenopus laevis AAH77185 I 0.869
AAH77393 Xenopus laevis AAH77393 I 0.869
srsf7 Xenopus tropicalis ENSXETG00000025300 I 0.869
ENSRNOG00000025091 Rattus norvegicus ENSRNOG00000025091 I 0.867
ENSDARG00000054296 Danio rerio ENSDARG00000054296 I 0.845
SRSF7 Tursiops truncatus ENSTTRG00000014324 I 0.831
ENSRNOG00000033319 Rattus norvegicus ENSRNOG00000033319 I 0.807
ENSGALG00000013825 Gallus gallus ENSGALG00000013825 I 0.795
SRSF7 Gasterosteus aculeatus ENSGACG00000012311 I 0.786
SRSF7 Tetraodon nigroviridis ENSTNIG00000014279 I 0.786
SRSF7 Takifugu rubripes ENSTRUG00000010529 I 0.786
SRSF7 Oryzias latipes ENSORLG00000000746 I 0.762
SRSF7 Danio rerio ENSDARG00000035325 I 0.750
PHUM241330 Pediculus humanus PHUM241330 I 0.747
BGIBMGA010396 Bombyx mori BGIBMGA010396 I 0.747
amel4_ncbi_hmm42637 Apis mellifera amel4_ncbi_hmm42637 I 0.726
CpipJ_CPIJ013237 Culex pipiens CpipJ_CPIJ013237 I 0.723
CPIJ013237 Culex quinquefasciatus CPIJ013237 I 0.723
estExt_Genewise1.C_1590063 Capitella teleta estExt_Genewise1.C_1590063 I 0.711
AAEL017082 Aedes aegypti AAEL017082 I 0.702