SRSF7 (Cavia porcellus)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		ENSCPOG00000011785 T07216_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF7
M353_0.6 		Homo sapiens ACGAGAGAY SELEX
Cook et al.(2011)
954_10094314 		1.000
SRSF7
M331_0.6 		Homo sapiens AGACKACGAY SELEX
Cook et al.(2011)
790_10094314 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000010600 RRM 13 78
ENSCPOP00000010600 CCHC ZF 104 120

Links

Other CCHC ZF,RRM family RBPs
Other Cavia porcellus RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF7 Procavia capensis ENSPCAG00000011348 I 1.000
ENSPPYG00000012480 Pongo pygmaeus ENSPPYG00000012480 I 1.000
SRSF7 Pan troglodytes ENSPTRG00000011851 I 1.000
SRSF7 Ochotona princeps ENSOPRG00000010234 I 1.000
SRSF7 Otolemur garnettii ENSOGAG00000010169 I 1.000
SRSF7 Ornithorhynchus anatinus ENSOANG00000004405 I 1.000
SRSF7 Oryctolagus cuniculus ENSOCUG00000004087 I 1.000
SRSF7 Pteropus vampyrus ENSPVAG00000012076 I 1.000
Sfrs7 Rattus norvegicus ENSRNOG00000027360 I 1.000
SFRS7_BOVIN Bos taurus ENSBTAG00000014891 I 1.000
ENSCAFG00000006272 Canis familiaris ENSCAFG00000006272 I 1.000
LOC100385878 Callithrix jacchus ENSCJAG00000015185 I 1.000
SRSF7 Anolis carolinensis ENSACAG00000006082 I 1.000
SRSF7 Vicugna pacos ENSVPAG00000003316 I 1.000
SRSF7 Tupaia belangeri ENSTBEG00000004604 I 1.000
SRSF7 Tarsius syrichta ENSTSYG00000012273 I 1.000
Srsf7 Mus musculus ENSMUSG00000024097 I 1.000
SRSF7 Sus scrofa ENSSSCG00000008484 I 1.000
SRSF7 Homo sapiens ENSG00000115875 D 1.000
SRSF7 Loxodonta africana ENSLAFG00000005666 I 1.000
Srsf7 Dipodomys ordii ENSDORG00000008616 I 1.000
LOC100054033 Equus caballus ENSECAG00000008664 I 1.000
SRSF7 Erinaceus europaeus ENSEEUG00000014487 I 1.000
SRSF7 Dasypus novemcinctus ENSDNOG00000007821 I 1.000
SRSF7 Gorilla gorilla ENSGGOG00000014620 I 1.000
ENSMODG00000008669 Monodelphis domestica ENSMODG00000008669 I 1.000
SRSF7 Macaca mulatta ENSMMUG00000011025 I 1.000
SRSF7 Myotis lucifugus ENSMLUG00000015692 I 1.000
ENSMEUG00000016459 Macropus eugenii ENSMEUG00000016459 I 1.000
SRSF7 Meleagris gallopavo ENSMGAG00000007415 I 1.000
Ame_R012465 Ailuropoda melanoleuca Ame_R012465 I 0.988
B5FZ53_TAEGU Taeniopygia guttata ENSTGUG00000002095 I 0.976
SFRS7 Taeniopygia guttata ENSTGUG00000002080 I 0.976
Q5ZMI0_CHICK Gallus gallus ENSGALG00000013819 I 0.976
ENSMODG00000023693 Monodelphis domestica ENSMODG00000023693 I 0.976
ENSMEUG00000000773 Macropus eugenii ENSMEUG00000000773 I 0.976
AAH77393 Xenopus laevis AAH77393 I 0.964
AAH77185 Xenopus laevis AAH77185 I 0.964
srsf7 Xenopus tropicalis ENSXETG00000025300 I 0.964
ENSRNOG00000025091 Rattus norvegicus ENSRNOG00000025091 I 0.952
ENSDARG00000054296 Danio rerio ENSDARG00000054296 I 0.940
SRSF7 Tursiops truncatus ENSTTRG00000014324 I 0.928
ENSCHOG00000002390 Choloepus hoffmanni ENSCHOG00000002390 I 0.904
ENSRNOG00000033319 Rattus norvegicus ENSRNOG00000033319 I 0.904
ENSGALG00000013825 Gallus gallus ENSGALG00000013825 I 0.880
SRSF7 Gasterosteus aculeatus ENSGACG00000012311 I 0.845
SRSF7 Tetraodon nigroviridis ENSTNIG00000014279 I 0.845
SRSF7 Takifugu rubripes ENSTRUG00000010529 I 0.845
SRSF7 Oryzias latipes ENSORLG00000000746 I 0.821
SRSF7 Danio rerio ENSDARG00000035325 I 0.821
PHUM241330 Pediculus humanus PHUM241330 I 0.795
BGIBMGA010396 Bombyx mori BGIBMGA010396 I 0.795
amel4_ncbi_hmm42637 Apis mellifera amel4_ncbi_hmm42637 I 0.774
CPIJ013237 Culex quinquefasciatus CPIJ013237 I 0.771
CpipJ_CPIJ013237 Culex pipiens CpipJ_CPIJ013237 I 0.771
estExt_Genewise1.C_1590063 Capitella teleta estExt_Genewise1.C_1590063 I 0.759
AAEL017082 Aedes aegypti AAEL017082 I 0.750
DGIL_AUG5s7527g2t1 Acyrtosiphon pisum DGIL_AUG5s7527g2t1 I 0.750
ISCW006562 Ixodes scapularis ISCW006562 I 0.738
PHUM284060 Pediculus humanus PHUM284060 I 0.738
AGAP008303 Anopheles gambiae AGAP008303 I 0.735
fgenesh2_pg.scaffold_208000073 Branchiostoma floridae fgenesh2_pg.scaffold_208000073 I 0.714
e_gw.267.117.1 Branchiostoma floridae e_gw.267.117.1 I 0.714
Smp_098890 Schistosoma mansoni Smp_098890 I 0.702
gw1.10.611.1 Lottia gigantea gw1.10.611.1 I 0.702