CPIJ013237 (Culex quinquefasciatus)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		CPIJ013237 T07190_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF7
M353_0.6 		Homo sapiens ACGAGAGAY SELEX
Cook et al.(2011)
954_10094314 		0.771
SRSF7
M331_0.6 		Homo sapiens AGACKACGAY SELEX
Cook et al.(2011)
790_10094314 		0.771
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CPIJ013237-PA RRM 10 75
CPIJ013237-PA CCHC ZF 114 130

Links

Other CCHC ZF,RRM family RBPs
Other Culex quinquefasciatus RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CpipJ_CPIJ013237 Culex pipiens CpipJ_CPIJ013237 I 1.000
AAEL017082 Aedes aegypti AAEL017082 I 0.940
AGAP008303 Anopheles gambiae AGAP008303 I 0.916
BGIBMGA010396 Bombyx mori BGIBMGA010396 I 0.916
amel4_ncbi_hmm42637 Apis mellifera amel4_ncbi_hmm42637 I 0.857
PHUM241330 Pediculus humanus PHUM241330 I 0.855
DGIL_AUG5s7527g2t1 Acyrtosiphon pisum DGIL_AUG5s7527g2t1 I 0.810
PHUM284060 Pediculus humanus PHUM284060 I 0.786
SRSF7 Procavia capensis ENSPCAG00000011348 I 0.771
SRSF7 Anolis carolinensis ENSACAG00000006082 I 0.771
SRSF7 Ochotona princeps ENSOPRG00000010234 I 0.771
SRSF7 Otolemur garnettii ENSOGAG00000010169 I 0.771
SRSF7 Ornithorhynchus anatinus ENSOANG00000004405 I 0.771
SRSF7 Oryctolagus cuniculus ENSOCUG00000004087 I 0.771
SRSF7 Pan troglodytes ENSPTRG00000011851 I 0.771
SRSF7 Tarsius syrichta ENSTSYG00000012273 I 0.771
Srsf7 Mus musculus ENSMUSG00000024097 I 0.771
SRSF7 Vicugna pacos ENSVPAG00000003316 I 0.771
SRSF7 Tupaia belangeri ENSTBEG00000004604 I 0.771
SRSF7 Sus scrofa ENSSSCG00000008484 I 0.771
Sfrs7 Rattus norvegicus ENSRNOG00000027360 I 0.771
SRSF7 Pteropus vampyrus ENSPVAG00000012076 I 0.771
ENSPPYG00000012480 Pongo pygmaeus ENSPPYG00000012480 I 0.771
LOC100054033 Equus caballus ENSECAG00000008664 I 0.771
SRSF7 Erinaceus europaeus ENSEEUG00000014487 I 0.771
SRSF7 Homo sapiens ENSG00000115875 D 0.771
SRSF7 Dasypus novemcinctus ENSDNOG00000007821 I 0.771
SRSF7 Cavia porcellus ENSCPOG00000011785 I 0.771
SFRS7_BOVIN Bos taurus ENSBTAG00000014891 I 0.771
ENSCAFG00000006272 Canis familiaris ENSCAFG00000006272 I 0.771
LOC100385878 Callithrix jacchus ENSCJAG00000015185 I 0.771
SRSF7 Gorilla gorilla ENSGGOG00000014620 I 0.771
Srsf7 Dipodomys ordii ENSDORG00000008616 I 0.771
ENSMEUG00000016459 Macropus eugenii ENSMEUG00000016459 I 0.771
SRSF7 Meleagris gallopavo ENSMGAG00000007415 I 0.771
SRSF7 Loxodonta africana ENSLAFG00000005666 I 0.771
SRSF7 Myotis lucifugus ENSMLUG00000015692 I 0.771
ENSMODG00000008669 Monodelphis domestica ENSMODG00000008669 I 0.771
SRSF7 Macaca mulatta ENSMMUG00000011025 I 0.771
AAH77185 Xenopus laevis AAH77185 I 0.762
AAH77393 Xenopus laevis AAH77393 I 0.762
srsf7 Xenopus tropicalis ENSXETG00000025300 I 0.762
Ame_R012465 Ailuropoda melanoleuca Ame_R012465 I 0.762
Q5ZMI0_CHICK Gallus gallus ENSGALG00000013819 I 0.759
estExt_Genewise1.C_1590063 Capitella teleta estExt_Genewise1.C_1590063 I 0.759
B5FZ53_TAEGU Taeniopygia guttata ENSTGUG00000002095 I 0.759
SFRS7 Taeniopygia guttata ENSTGUG00000002080 I 0.759
ENSDARG00000054296 Danio rerio ENSDARG00000054296 I 0.750
SRSF7 Tetraodon nigroviridis ENSTNIG00000014279 I 0.750
xl6 Drosophila melanogaster FBgn0028554 N 0.750
ISCW006562 Ixodes scapularis ISCW006562 I 0.750
SRSF7 Gasterosteus aculeatus ENSGACG00000012311 I 0.750
SRSF7 Takifugu rubripes ENSTRUG00000010529 I 0.750
ENSMEUG00000000773 Macropus eugenii ENSMEUG00000000773 I 0.747
ENSMODG00000023693 Monodelphis domestica ENSMODG00000023693 I 0.747
e_gw.267.117.1 Branchiostoma floridae e_gw.267.117.1 I 0.738
SRSF7 Danio rerio ENSDARG00000035325 I 0.738
fgenesh2_pg.scaffold_208000073 Branchiostoma floridae fgenesh2_pg.scaffold_208000073 I 0.738
SRSF7 Oryzias latipes ENSORLG00000000746 I 0.738
ENSRNOG00000025091 Rattus norvegicus ENSRNOG00000025091 I 0.735
ENSCHOG00000002390 Choloepus hoffmanni ENSCHOG00000002390 I 0.723
Smp_098890 Schistosoma mansoni Smp_098890 I 0.702
e_gw.410.34.1 Nematostella vectensis e_gw.410.34.1 N 0.702
gw1.10.611.1 Lottia gigantea gw1.10.611.1 I 0.702