LOC_Os05g18230 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os05g18230 T11434_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g18230.1 CCHC ZF 590 607

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

599 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CMU_010160 Cryptosporidium muris CMU_010160 N 0.000
cassava42201.valid.m1 Manihot esculenta cassava42201.valid.m1 N 0.000
cassava42200.valid.m1 Manihot esculenta cassava42200.valid.m1 N 0.000
cassava34306.m1 Manihot esculenta cassava34306.m1 N 0.000
BGIOSIBCE028949 Oryza indica BGIOSIBCE028949 N 0.000
LOC_Os09g01640 Oryza sativa LOC_Os09g01640 N 0.000
B9MTX0_POPTR Populus trichocarpa POPTR_0001s03100 N 0.000
29977.m000253 Ricinus communis 29977.m000253 N 0.000
TGME49_044840 Toxoplasma gondii TGME49_044840 N 0.000
TGVEG_104640 Toxoplasma gondii TGVEG_104640 N 0.000