CSDA (Tursiops truncatus)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSTTRG00000008045 T17059_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YB-1
M111_0.6 		Homo sapiens AACAUCD RNAcompete
Ray et al.(2013)
RNCMPT00116 		0.718
YB-1
M081_0.6 		Homo sapiens AACAUC RNAcompete
Ray et al.(2013)
RNCMPT00083 		0.718
ybx2-a
M250_0.6 		Xenopus laevis UAACAUC SELEX
Cook et al.(2011)
114_7499328 		0.704
ybx2-a
M260_0.6 		Xenopus laevis GCCANACCAYCGC SELEX
Cook et al.(2011)
130_11376140 		0.704
ybx2-a
M254_0.6 		Xenopus laevis KAACAUCU SELEX
Cook et al.(2011)
115_7499328 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000007616 CSD 1 51

Links

Other CSD family RBPs
Other Tursiops truncatus RBPs

104 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R009605 Ailuropoda melanoleuca Ame_R009605 N 0.000
RAVER1 Anolis carolinensis ENSACAG00000008386 N 0.000
A4FUZ2_BOVIN Bos taurus ENSBTAG00000015721 N 0.000
RAVER1 Canis familiaris ENSCAFG00000017861 N 0.000
RAVER1 Cavia porcellus ENSCPOG00000001008 N 0.000
Raver1 Dipodomys ordii ENSDORG00000010106 N 0.000
RAVER1 Equus caballus ENSECAG00000024966 N 0.000
RAVER1 Felis catus ENSFCAG00000009435 N 0.000
RAVER1 Gorilla gorilla ENSGGOG00000006015 N 0.000
RAVER1 Homo sapiens ENSG00000161847 N 0.000
RAVER1 Loxodonta africana ENSLAFG00000003664 N 0.000
RAVER1 Macaca mulatta ENSMMUG00000014897 N 0.000
RAVER1 Macropus eugenii ENSMEUG00000003281 N 0.000
RAVER1 Microcebus murinus ENSMICG00000010326 N 0.000
RAVER1 Monodelphis domestica ENSMODG00000005584 N 0.000
Raver1 Mus musculus ENSMUSG00000010205 N 0.000
RAVER1 Myotis lucifugus ENSMLUG00000012328 N 0.000
RAVER1 Oryctolagus cuniculus ENSOCUG00000020918 N 0.000
RAVER1 Pan troglodytes ENSPTRG00000010466 N 0.000
ENSPPYG00000010514 Pongo pygmaeus ENSPPYG00000010514 N 0.000
RAVER1 Pteropus vampyrus ENSPVAG00000003689 N 0.000
Raver1 Rattus norvegicus ENSRNOG00000020710 N 0.000
RAVER1 Spermophilus tridecemlineatus ENSSTOG00000003241 N 0.000
RAVER1 Sus scrofa ENSSSCG00000013650 N 0.000
RAVER1 Tursiops truncatus ENSTTRG00000009552 N 0.000
AAH70699 Xenopus laevis AAH70699 N 0.000
raver1 Xenopus tropicalis ENSXETG00000011622 N 0.000