MEX3B (Ochotona princeps)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOPRG00000009604 T19255_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.877
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000008773 KH 26 86
ENSOPRP00000008773 KH 121 180

Links

Other KH family RBPs
Other Ochotona princeps RBPs

162 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002879859.1 Arabidopsis lyrata scaffold_402914.1 N 0.000
XM_002878068.1 Arabidopsis lyrata fgenesh2_kg.5__2117__AT3G56860.3 N 0.000
AT2G41060 Arabidopsis thaliana AT2G41060-TAIR-G N 0.000
UBA2A Arabidopsis thaliana AT3G56860-TAIR-G N 0.000
PK27017.1 Cannabis sativa PK27017.1 N 0.000
PK11606.1 Cannabis sativa PK11606.1 N 0.000
Cucsa.250370 Cucumis sativus Cucsa.250370 N 0.000
Glyma02g44330.1 Glycine max Glyma02g44330.1 N 0.000
Glyma03g27290.1 Glycine max Glyma03g27290.1 N 0.000
Glyma14g04480.1 Glycine max Glyma14g04480.1 N 0.000
Glyma19g30250.1 Glycine max Glyma19g30250.1 N 0.000
chr2.CM0031.350.nc Lotus japonicus chr2.CM0031.350.nc N 0.000
MDP0000218409 Malus x domestica MDP0000218409 N 0.000
MDP0000381936 Malus x domestica MDP0000381936 N 0.000
MDP0000792725 Malus x domestica MDP0000792725 N 0.000
MDP0000905699 Malus x domestica MDP0000905699 N 0.000
cassava8977.m1 Manihot esculenta cassava8977.m1 N 0.000
cassava6906.valid.m1 Manihot esculenta cassava6906.valid.m1 N 0.000
cassava22358.valid.m1 Manihot esculenta cassava22358.valid.m1 N 0.000
cassava22357.valid.m1 Manihot esculenta cassava22357.valid.m1 N 0.000
cassava22355.valid.m1 Manihot esculenta cassava22355.valid.m1 N 0.000
cassava22354.valid.m1 Manihot esculenta cassava22354.valid.m1 N 0.000
cassava22353.valid.m1 Manihot esculenta cassava22353.valid.m1 N 0.000
Medtr5g095270 Medicago truncatula Medtr5g095270 N 0.000
mgf019210m Mimulus guttatus mgf019210m N 0.000
mgf012484m Mimulus guttatus mgf012484m N 0.000
mgf002509m Mimulus guttatus mgf002509m N 0.000
BGIOSIBCE001249 Oryza indica BGIOSIBCE001249 N 0.000
LOC_Os01g16090 Oryza sativa LOC_Os01g16090 N 0.000
B9IHG4_POPTR Populus trichocarpa POPTR_0016s02440 N 0.000
B9HDH2_POPTR Populus trichocarpa POPTR_0006s02650 N 0.000
ppa004648m Prunus persica ppa004648m N 0.000
30006.m000276 Ricinus communis 30006.m000276 N 0.000
30099.m001684 Ricinus communis 30099.m001684 N 0.000
GSVIVG00037491001 Vitis vinifera GSVIVG00037491001 N 0.000