CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSPPYG00000002035
(
Pongo pygmaeus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSPPYG00000002035
T22830_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000002354
La
160
217
LKKTLEFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSL
Links
Other
La
family RBPs
Other
Pongo pygmaeus
RBPs
73 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XM_002864797.1
Arabidopsis lyrata
fgenesh2_kg.8__2325__AT5G63260.1
N
0.000
XM_002875858.1
Arabidopsis lyrata
scaffold_501792.1
N
0.000
AT3G48440
Arabidopsis thaliana
AT3G48440-TAIR-G
N
0.000
AT5G63260
Arabidopsis thaliana
AT5G63260-TAIR-G
N
0.000
PK26637.1
Cannabis sativa
PK26637.1
N
0.000
Cucsa.391690
Cucumis sativus
Cucsa.391690
N
0.000
Glyma06g18240.1
Glycine max
Glyma06g18240.1
N
0.000
Glyma04g36670.1
Glycine max
Glyma04g36670.1
N
0.000
Glyma05g02920.1
Glycine max
Glyma05g02920.1
N
0.000
Glyma17g13580.1
Glycine max
Glyma17g13580.1
N
0.000
LjSGA_006961.1
Lotus japonicus
LjSGA_006961.1
N
0.000
cassava531.valid.m1
Manihot esculenta
cassava531.valid.m1
N
0.000
Medtr8g109990
Medicago truncatula
Medtr8g109990
N
0.000
ppa004690m
Prunus persica
ppa004690m
N
0.000
30147.m013813
Ricinus communis
30147.m013813
N
0.000
GSVIVG00007563001
Vitis vinifera
GSVIVG00007563001
N
0.000