An01g14180 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00001415 T33537_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00001367 RRM 182 250
CADANGAP00001367 RRM 281 350
CADANGAP00001367 RRM 495 551

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002867008.1 Arabidopsis lyrata scaffold_700530.1 N 0.000
AT4G35785 Arabidopsis thaliana AT4G35785-TAIR-G N 0.000
BRADI1G29990 Brachypodium distachyon BRADI1G29990 N 0.000
PK05232.1 Cannabis sativa PK05232.1 N 0.000
PK15963.1 Cannabis sativa PK15963.1 N 0.000
Cucsa.043980 Cucumis sativus Cucsa.043980 N 0.000
Glyma01g36670.1 Glycine max Glyma01g36670.1 N 0.000
Glyma02g04980.1 Glycine max Glyma02g04980.1 N 0.000
Glyma16g23010.1 Glycine max Glyma16g23010.1 N 0.000
MDP0000285029 Malus x domestica MDP0000285029 N 0.000
MDP0000304811 Malus x domestica MDP0000304811 N 0.000
cassava35282.valid.m1 Manihot esculenta cassava35282.valid.m1 N 0.000
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.000
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.000
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.000
Medtr5g023040 Medicago truncatula Medtr5g023040 N 0.000
mgf018316m Mimulus guttatus mgf018316m N 0.000
mgf010666m Mimulus guttatus mgf010666m N 0.000
mgf000980m Mimulus guttatus mgf000980m N 0.000
BGIOSIBSE038661 Oryza indica BGIOSIBSE038661 N 0.000
BGIOSIBCE023334 Oryza indica BGIOSIBCE023334 N 0.000
LOC_Os06g50890 Oryza sativa LOC_Os06g50890 N 0.000
LOC_Os08g29650 Oryza sativa LOC_Os08g29650 N 0.000
PDK_20s1771821g002 Phoenix dactylifera PDK_20s1771821g002 N 0.000
e_gw1.234.40.1 Physcomitrella patens e_gw1.234.40.1 N 0.000
gw1.21.172.1 Physcomitrella patens gw1.21.172.1 N 0.000
gw1.27.117.1 Physcomitrella patens gw1.27.117.1 N 0.000
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.000
B9MX89_POPTR Populus trichocarpa POPTR_0005s10780 N 0.000
ppa010685m Prunus persica ppa010685m N 0.000
ppa011480m Prunus persica ppa011480m N 0.000
29784.m000370 Ricinus communis 29784.m000370 N 0.000
30190.m011248 Ricinus communis 30190.m011248 N 0.000
SB10G030460 Sorghum bicolor Sb10g030460 N 0.000
GSVIVG00005197001 Vitis vinifera GSVIVG00005197001 N 0.000
GRMZM2G152111 Zea mays GRMZM2G152111 N 0.000