PK15963.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK15963.1 T31711_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK15963.1 RRM 91 161

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9MX89_POPTR Populus trichocarpa POPTR_0005s10780 N 0.901
29784.m000370 Ricinus communis 29784.m000370 N 0.887
Cucsa.043980 Cucumis sativus Cucsa.043980 N 0.887
Glyma01g36670.1 Glycine max Glyma01g36670.1 N 0.873
XM_002867008.1 Arabidopsis lyrata scaffold_700530.1 N 0.873
Medtr8g088990 Medicago truncatula Medtr8g088990 N 0.873
Glyma16g23010.1 Glycine max Glyma16g23010.1 N 0.859
Glyma02g04980.1 Glycine max Glyma02g04980.1 N 0.859
ppa010685m Prunus persica ppa010685m N 0.859
GSVIVG00005197001 Vitis vinifera GSVIVG00005197001 N 0.859
Medtr5g023040 Medicago truncatula Medtr5g023040 N 0.859
MDP0000304811 Malus x domestica MDP0000304811 N 0.845
mgf010666m Mimulus guttatus mgf010666m N 0.845
mgf018316m Mimulus guttatus mgf018316m N 0.845
mgf000980m Mimulus guttatus mgf000980m N 0.845
AT4G35785 Arabidopsis thaliana AT4G35785-TAIR-G N 0.845
cassava35282.valid.m1 Manihot esculenta cassava35282.valid.m1 N 0.831
MDP0000285029 Malus x domestica MDP0000285029 N 0.831
PDK_20s1771821g002 Phoenix dactylifera PDK_20s1771821g002 N 0.831
LOC_Os06g50890 Oryza sativa LOC_Os06g50890 N 0.803
BGIOSIBCE023334 Oryza indica BGIOSIBCE023334 N 0.803
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.746
gw1.21.172.1 Physcomitrella patens gw1.21.172.1 N 0.746
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.746
BRADI1G29990 Brachypodium distachyon BRADI1G29990 N 0.746
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.746
BGIOSIBSE038661 Oryza indica BGIOSIBSE038661 N 0.732
LOC_Os08g29650 Oryza sativa LOC_Os08g29650 N 0.732
SB10G030460 Sorghum bicolor Sb10g030460 N 0.732
e_gw1.3.92.1 Selaginella moellendorfii e_gw1.3.92.1 N 0.718
MDP0000238655 Malus x domestica MDP0000238655 N 0.718
30190.m011248 Ricinus communis 30190.m011248 N 0.718
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.718
e_gw1.25.252.1 Selaginella moellendorfii e_gw1.25.252.1 N 0.718
ppa011480m Prunus persica ppa011480m N 0.704
e_gw1.234.40.1 Physcomitrella patens e_gw1.234.40.1 N 0.704
gw1.27.117.1 Physcomitrella patens gw1.27.117.1 N 0.704
GRMZM2G152111 Zea mays GRMZM2G152111 N 0.704