LOC_Os08g29650 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os08g29650 T45105_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os08g29650.1 RRM 93 163

Links

Other RRM family RBPs
Other Oryza sativa RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBSE038661 Oryza indica BGIOSIBSE038661 N 1.000
SB07G019390 Sorghum bicolor Sb07g019390 N 0.915
GRMZM2G031846 Zea mays GRMZM2G031846 N 0.887
BRADI1G29180 Brachypodium distachyon BRADI1G29180 N 0.831
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.803
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.803
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.803
ppa011480m Prunus persica ppa011480m N 0.775
MDP0000140238 Malus x domestica MDP0000140238 N 0.761
PDK_20s1416111g002 Phoenix dactylifera PDK_20s1416111g002 N 0.746
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.746
30190.m011248 Ricinus communis 30190.m011248 N 0.746
XM_002867008.1 Arabidopsis lyrata scaffold_700530.1 N 0.732
PK05232.1 Cannabis sativa PK05232.1 N 0.732
PK15963.1 Cannabis sativa PK15963.1 N 0.732
B9MX89_POPTR Populus trichocarpa POPTR_0005s10780 N 0.732
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.732
ppa010685m Prunus persica ppa010685m N 0.718
Glyma01g36670.1 Glycine max Glyma01g36670.1 N 0.718
Cucsa.043980 Cucumis sativus Cucsa.043980 N 0.718
Glyma02g04980.1 Glycine max Glyma02g04980.1 N 0.718
MDP0000304811 Malus x domestica MDP0000304811 N 0.718
Glyma16g23010.1 Glycine max Glyma16g23010.1 N 0.718
Glyma10g41320.1 Glycine max Glyma10g41320.1 N 0.718
LOC_Os06g50890 Oryza sativa LOC_Os06g50890 N 0.704
BGIOSIBCE023334 Oryza indica BGIOSIBCE023334 N 0.704
AT4G35785 Arabidopsis thaliana AT4G35785-TAIR-G N 0.704
Medtr5g023040 Medicago truncatula Medtr5g023040 N 0.704
29784.m000370 Ricinus communis 29784.m000370 N 0.704
gw1.19.297.1 Selaginella moellendorfii gw1.19.297.1 N 0.704
gw1.21.172.1 Physcomitrella patens gw1.21.172.1 N 0.704
Medtr8g088990 Medicago truncatula Medtr8g088990 N 0.704
MDP0000285029 Malus x domestica MDP0000285029 N 0.704