Glyma16g23010.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma16g23010.1 T52881_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma16g23010.1 RRM 73 143

Links

Other RRM family RBPs
Other Glycine max RBPs

45 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma02g04980.1 Glycine max Glyma02g04980.1 N 1.000
Medtr5g023040 Medicago truncatula Medtr5g023040 N 0.930
Glyma01g36670.1 Glycine max Glyma01g36670.1 N 0.915
Medtr8g088990 Medicago truncatula Medtr8g088990 N 0.915
ppa010685m Prunus persica ppa010685m N 0.873
29784.m000370 Ricinus communis 29784.m000370 N 0.873
B9MX89_POPTR Populus trichocarpa POPTR_0005s10780 N 0.873
mgf018316m Mimulus guttatus mgf018316m N 0.873
mgf010666m Mimulus guttatus mgf010666m N 0.873
mgf000980m Mimulus guttatus mgf000980m N 0.873
GSVIVG00005197001 Vitis vinifera GSVIVG00005197001 N 0.859
PK15963.1 Cannabis sativa PK15963.1 N 0.859
cassava35282.valid.m1 Manihot esculenta cassava35282.valid.m1 N 0.859
Cucsa.043980 Cucumis sativus Cucsa.043980 N 0.859
PDK_20s1771821g002 Phoenix dactylifera PDK_20s1771821g002 N 0.859
MDP0000304811 Malus x domestica MDP0000304811 N 0.859
XM_002867008.1 Arabidopsis lyrata scaffold_700530.1 N 0.845
AT4G35785 Arabidopsis thaliana AT4G35785-TAIR-G N 0.845
MDP0000285029 Malus x domestica MDP0000285029 N 0.845
LOC_Os06g50890 Oryza sativa LOC_Os06g50890 N 0.775
BGIOSIBCE023334 Oryza indica BGIOSIBCE023334 N 0.775
e_gw1.234.40.1 Physcomitrella patens e_gw1.234.40.1 N 0.761
30190.m011248 Ricinus communis 30190.m011248 N 0.761
gw1.27.117.1 Physcomitrella patens gw1.27.117.1 N 0.761
gw1.21.172.1 Physcomitrella patens gw1.21.172.1 N 0.746
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.746
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.746
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.746
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.746
ppa011480m Prunus persica ppa011480m N 0.732
gw1.3.275.1 Physcomitrella patens gw1.3.275.1 N 0.732
SB10G030460 Sorghum bicolor Sb10g030460 N 0.732
BGIOSIBSE038661 Oryza indica BGIOSIBSE038661 N 0.718
LOC_Os08g29650 Oryza sativa LOC_Os08g29650 N 0.718
PK05232.1 Cannabis sativa PK05232.1 N 0.718
BRADI1G29990 Brachypodium distachyon BRADI1G29990 N 0.718
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.718
mgf011871m Mimulus guttatus mgf011871m N 0.704
GRMZM2G152111 Zea mays GRMZM2G152111 N 0.704
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.704
e_gw1.3.92.1 Selaginella moellendorfii e_gw1.3.92.1 N 0.704
PDK_20s1416111g002 Phoenix dactylifera PDK_20s1416111g002 N 0.704
Glyma18g07500.1 Glycine max Glyma18g07500.1 N 0.704
MDP0000140238 Malus x domestica MDP0000140238 N 0.704
e_gw1.25.252.1 Selaginella moellendorfii e_gw1.25.252.1 N 0.704