30190.m011248 (Ricinus communis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 30190.m011248 T48792_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
30190.m011248 RRM 49 119

Links

Other RRM family RBPs
Other Ricinus communis RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK05232.1 Cannabis sativa PK05232.1 N 0.930
ppa011480m Prunus persica ppa011480m N 0.901
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.901
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.887
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.887
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.887
GSVIVG00019390001 Vitis vinifera GSVIVG00019390001 N 0.859
PDK_20s1416111g002 Phoenix dactylifera PDK_20s1416111g002 N 0.859
MDP0000140238 Malus x domestica MDP0000140238 N 0.831
mgf011871m Mimulus guttatus mgf011871m N 0.803
B9GKF3_POPTR Populus trichocarpa POPTR_0001s09650 N 0.789
gw1.27.117.1 Physcomitrella patens gw1.27.117.1 N 0.789
e_gw1.234.40.1 Physcomitrella patens e_gw1.234.40.1 N 0.789
SB07G019390 Sorghum bicolor Sb07g019390 N 0.775
Glyma18g07500.1 Glycine max Glyma18g07500.1 N 0.775
Glyma10g41320.1 Glycine max Glyma10g41320.1 N 0.775
GRMZM2G031846 Zea mays GRMZM2G031846 N 0.761
AT4G35785 Arabidopsis thaliana AT4G35785-TAIR-G N 0.761
LjB08M07.70.nc Lotus japonicus LjB08M07.70.nc N 0.761
gw1.3.275.1 Physcomitrella patens gw1.3.275.1 N 0.761
Glyma16g23010.1 Glycine max Glyma16g23010.1 N 0.761
gw1.19.297.1 Selaginella moellendorfii gw1.19.297.1 N 0.761
Glyma08g45200.1 Glycine max Glyma08g45200.1 N 0.761
Glyma02g04980.1 Glycine max Glyma02g04980.1 N 0.761
XM_002867008.1 Arabidopsis lyrata scaffold_700530.1 N 0.746
LOC_Os08g29650 Oryza sativa LOC_Os08g29650 N 0.746
BGIOSIBSE038661 Oryza indica BGIOSIBSE038661 N 0.746
PDK_20s1771821g002 Phoenix dactylifera PDK_20s1771821g002 N 0.746
29784.m000370 Ricinus communis 29784.m000370 N 0.746
gw1.21.172.1 Physcomitrella patens gw1.21.172.1 N 0.746
mgf010666m Mimulus guttatus mgf010666m N 0.732
Glyma01g36670.1 Glycine max Glyma01g36670.1 N 0.732
GSVIVG00005197001 Vitis vinifera GSVIVG00005197001 N 0.732
GSVIVG00024805001 Vitis vinifera GSVIVG00024805001 N 0.732
B9MX89_POPTR Populus trichocarpa POPTR_0005s10780 N 0.732
BRADI1G29180 Brachypodium distachyon BRADI1G29180 N 0.732
mgf000980m Mimulus guttatus mgf000980m N 0.732
Medtr5g023040 Medicago truncatula Medtr5g023040 N 0.732
Medtr8g088990 Medicago truncatula Medtr8g088990 N 0.732
29751.m001798 Ricinus communis 29751.m001798 N 0.732
cassava35282.valid.m1 Manihot esculenta cassava35282.valid.m1 N 0.732
mgf018316m Mimulus guttatus mgf018316m N 0.732
Cucsa.043980 Cucumis sativus Cucsa.043980 N 0.718
e_gw1.25.252.1 Selaginella moellendorfii e_gw1.25.252.1 N 0.718
PK15963.1 Cannabis sativa PK15963.1 N 0.718
MDP0000304811 Malus x domestica MDP0000304811 N 0.718
ppa010685m Prunus persica ppa010685m N 0.718
PK25868.1 Cannabis sativa PK25868.1 N 0.718
e_gw1.3.92.1 Selaginella moellendorfii e_gw1.3.92.1 N 0.718
mg018590m Mimulus guttatus mg018590m N 0.704
MDP0000285029 Malus x domestica MDP0000285029 N 0.704
LOC_Os06g50890 Oryza sativa LOC_Os06g50890 N 0.704
BGIOSIBCE023334 Oryza indica BGIOSIBCE023334 N 0.704