MDP0000285029 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000285029 T57573_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000285029 RRM 97 167

Links

Other RRM family RBPs
Other Malus x domestica RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000304811 Malus x domestica MDP0000304811 N 0.972
ppa010685m Prunus persica ppa010685m N 0.958
Glyma01g36670.1 Glycine max Glyma01g36670.1 N 0.873
XM_002867008.1 Arabidopsis lyrata scaffold_700530.1 N 0.873
Medtr8g088990 Medicago truncatula Medtr8g088990 N 0.859
GSVIVG00005197001 Vitis vinifera GSVIVG00005197001 N 0.845
Glyma16g23010.1 Glycine max Glyma16g23010.1 N 0.845
Glyma02g04980.1 Glycine max Glyma02g04980.1 N 0.845
AT4G35785 Arabidopsis thaliana AT4G35785-TAIR-G N 0.845
Cucsa.043980 Cucumis sativus Cucsa.043980 N 0.831
29784.m000370 Ricinus communis 29784.m000370 N 0.831
B9MX89_POPTR Populus trichocarpa POPTR_0005s10780 N 0.831
PK15963.1 Cannabis sativa PK15963.1 N 0.831
Medtr5g023040 Medicago truncatula Medtr5g023040 N 0.831
mgf010666m Mimulus guttatus mgf010666m N 0.817
mgf000980m Mimulus guttatus mgf000980m N 0.817
mgf018316m Mimulus guttatus mgf018316m N 0.817
cassava35282.valid.m1 Manihot esculenta cassava35282.valid.m1 N 0.803
PDK_20s1771821g002 Phoenix dactylifera PDK_20s1771821g002 N 0.775
e_gw1.234.40.1 Physcomitrella patens e_gw1.234.40.1 N 0.718
gw1.27.117.1 Physcomitrella patens gw1.27.117.1 N 0.718
LOC_Os06g50890 Oryza sativa LOC_Os06g50890 N 0.718
BGIOSIBCE023334 Oryza indica BGIOSIBCE023334 N 0.718
30190.m011248 Ricinus communis 30190.m011248 N 0.704
LOC_Os08g29650 Oryza sativa LOC_Os08g29650 N 0.704
BGIOSIBSE038661 Oryza indica BGIOSIBSE038661 N 0.704
B9GWT8_POPTR Populus trichocarpa POPTR_0003s13030 N 0.704
SB10G030460 Sorghum bicolor Sb10g030460 N 0.704
cassava28820.valid.m1 Manihot esculenta cassava28820.valid.m1 N 0.704
cassava28819.valid.m1 Manihot esculenta cassava28819.valid.m1 N 0.704
cassava28821.valid.m1 Manihot esculenta cassava28821.valid.m1 N 0.704