CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Rbmx2
(
Mus musculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMUSG00000031107
T39308_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000033433
RRM
38
108
IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIR
Links
Other
RRM
family RBPs
Other
Mus musculus
RBPs
100 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DGIL_AUG5s13597g2t1
Acyrtosiphon pisum
DGIL_AUG5s13597g2t1
N
0.736
AAEL002461
Aedes aegypti
AAEL002461
N
0.806
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.972
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.806
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.806
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.958
AGAP000977
Anopheles gambiae
AGAP000977
N
0.806
estExt_fgenesh1_pg.C_30395
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_30395
N
0.736
LOC534630
Bos taurus
ENSBTAG00000006252
N
0.903
LOC613705
Bos taurus
ENSBTAG00000014771
N
0.875
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.833
Bm1_02690
Brugia malayi
Bm1_02690
N
0.750
CBN24057
Caenorhabditis brenneri
CBN24057
N
0.708
CBG02589
Caenorhabditis briggsae
CBG02589
N
0.722
C30B5.4
Caenorhabditis elegans
C30B5.4
N
0.708
CRE26315
Caenorhabditis remanei
CRE26315
N
0.736
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.972
RBMX2
Canis familiaris
ENSCAFG00000018770
N
0.932
gw1.462.53.1
Capitella teleta
gw1.462.53.1
N
0.792
CAOG_00327
Capsaspora owczarzaki
CAOG_00327
N
0.764
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.958
ENSCSAVG00000001047
Ciona savignyi
ENSCSAVG00000001047
N
0.778
CpipJ_CPIJ015641
Culex pipiens
CpipJ_CPIJ015641
N
0.733
CPIJ015641
Culex quinquefasciatus
CPIJ015641
N
0.733
rbmx2
Danio rerio
ENSDARG00000044380
N
0.903
estExt_Genewise1Plus.C_110324
Daphnia pulex
estExt_Genewise1Plus.C_110324
N
0.806
GF14433
Drosophila ananassae
FBgn0091460
N
0.833
GG21207
Drosophila erecta
FBgn0113387
N
0.819
GH13830
Drosophila grimshawi
FBgn0121306
N
0.806
CG10466
Drosophila melanogaster
FBgn0032822
N
0.806
GI11260
Drosophila mojavensis
FBgn0134021
N
0.819
GI20215
Drosophila mojavensis
FBgn0142951
N
0.819
GI11259
Drosophila mojavensis
FBgn0134020
N
0.819
GL26176
Drosophila persimilis
FBgn0163758
N
0.833
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.833
GM17378
Drosophila sechellia
FBgn0172288
N
0.806
GD24233
Drosophila simulans
FBgn0195582
N
0.806
GJ13600
Drosophila virilis
FBgn0200822
N
0.833
GK14925
Drosophila willistoni
FBgn0216930
N
0.833
GE13281
Drosophila yakuba
FBgn0230967
N
0.806
RBMX2
Echinops telfairi
ENSETEG00000001763
N
0.944
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.972
RBMX2
Erinaceus europaeus
ENSEEUG00000000839
N
0.944
RBMX2
Gallus gallus
ENSGALG00000004025
N
0.930
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.875
ENSGGOG00000016146
Gorilla gorilla
ENSGGOG00000016146
N
0.958
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.972
ENSGGOG00000026106
Gorilla gorilla
ENSGGOG00000026106
N
0.930
145168
Helobdella robusta
145168
N
0.764
RBMX2
Homo sapiens
ENSG00000134597
N
0.972
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.819
ISCW009356
Ixodes scapularis
ISCW009356
N
0.764
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.792
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.903
RBMX2
Loxodonta africana
ENSLAFG00000017625
N
0.919
ENSMMUG00000001001
Macaca mulatta
ENSMMUG00000001001
N
0.859
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.958
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.972
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.958
RBMX2
Meleagris gallopavo
ENSMGAG00000001801
N
0.915
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.972
ENSMODG00000011981
Monodelphis domestica
ENSMODG00000011981
N
0.806
ENSMODG00000019800
Monodelphis domestica
ENSMODG00000019800
N
0.944
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.958
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.722
gw1.1.2440.1
Mucor circinelloides
gw1.1.2440.1
N
0.722
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.972
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.931
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.819
gw.130.169.1
Nematostella vectensis
gw.130.169.1
N
0.778
RBMX2
Ornithorhynchus anatinus
ENSOANG00000001362
N
0.865
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.813
RBMX2
Oryctolagus cuniculus
ENSOCUG00000011809
N
0.918
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.889
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.972
ENSOGAG00000009060
Otolemur garnettii
ENSOGAG00000009060
N
0.915
XR_023755.1
Pan troglodytes
ENSPTRG00000022269
N
0.930
PHUM617480
Pediculus humanus
PHUM617480
N
0.819
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.792
ENSPPYG00000020717
Pongo pygmaeus
ENSPPYG00000020717
N
0.930
RBMX2
Procavia capensis
ENSPCAG00000012903
N
0.915
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.972
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.986
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.747
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.747
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.889
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.972
SPPG_01752
Spizellomyces punctatus
SPPG_01752
N
0.707
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.819
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.819
RBMX2
Taeniopygia guttata
ENSTGUG00000005239
N
0.803
RBMX2
Takifugu rubripes
ENSTRUG00000001699
N
0.903
RBMX2
Tarsius syrichta
ENSTSYG00000010611
N
0.833
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.889
gw1.1.3012.1
Tremella mesenterica
gw1.1.3012.1
N
0.708
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.750
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.972
e_gw1.98.15.1
Volvox carteri
e_gw1.98.15.1
N
0.708
WUBG_13107
Wuchereria bancrofti
WUBG_13107
N
0.750
AAH56844
Xenopus laevis
AAH56844
N
0.747