RBM39 (Otolemur garnettii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOGAG00000011227 T39876_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000010054 RRM 155 219
ENSOGAP00000010054 RRM 248 318
ENSOGAP00000010054 RRM 441 498

Links

Other RRM family RBPs
Other Otolemur garnettii RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.705
AAEL005046 Aedes aegypti AAEL005046 N 0.736
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.924
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.914
AGAP008433 Anopheles gambiae AGAP008433 N 0.710
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.730
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.924
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.924
RBM39 Canis familiaris ENSCAFG00000008327 N 0.924
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.859
ENSCPOG00000021775 Cavia porcellus ENSCPOG00000021775 N 0.813
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.739
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.739
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.739
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.739
rbm39b Danio rerio ENSDARG00000041853 N 0.823
rbm39a Danio rerio ENSDARG00000011613 N 0.828
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.729
GH13506 Drosophila grimshawi FBgn0120982 N 0.705
GK15272 Drosophila willistoni FBgn0217277 N 0.705
GE14328 Drosophila yakuba FBgn0231943 N 0.704
RBM39 Echinops telfairi ENSETEG00000016295 N 0.813
RBM39 Equus caballus ENSECAG00000013423 N 0.924
RBM39 Gallus gallus ENSGALG00000001550 N 0.919
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.796
RBM23 Gasterosteus aculeatus ENSGACG00000003376 N 0.808
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.899
RBM39 Homo sapiens ENSG00000131051 N 0.924
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.717
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.924
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.914
RBM39 Microcebus murinus ENSMICG00000001668 N 0.924
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.915
Rbm39 Mus musculus ENSMUSG00000027620 N 0.924
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.924
RBM23 Oryzias latipes ENSORLG00000009919 N 0.833
RBM23 Oryzias latipes ENSORLG00000010370 N 0.813
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.924
PHUM394230 Pediculus humanus PHUM394230 N 0.730
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.924
RBM39 Procavia capensis ENSPCAG00000008764 N 0.813
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.924
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.924
RBM39 Sorex araneus ENSSARG00000007673 N 0.924
RBM39 Sus scrofa ENSSSCG00000007309 N 0.924
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.919
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.813
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.924
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.818
RBM23 Tetraodon nigroviridis ENSTNIG00000005223 N 0.732
RBM39 Tupaia belangeri ENSTBEG00000017320 N 0.784
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.924
AAH75146 Xenopus laevis AAH75146 N 0.879
AAH77813 Xenopus laevis AAH77813 N 0.884
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.889