ENSORLG00000001620 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000001620 T40085_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000002010 RRM 102 171

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL005114 Aedes aegypti AAEL005114 N 0.700
AAEL015263 Aedes aegypti AAEL015263 N 0.700
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.786
Aqu1.225634 Amphimedon queenslandica Aqu1.225634 N 0.700
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.786
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.714
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.757
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.786
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.729
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.729
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.714
THOC4 Canis familiaris ENSCAFG00000005877 N 0.786
estExt_Genewise1.C_7200001 Capitella teleta estExt_Genewise1.C_7200001 N 0.700
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.786
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.700
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.700
tho4 Danio rerio ENSDARG00000077732 N 0.786
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.700
THOC4 Echinops telfairi ENSETEG00000016596 N 0.786
LOC100055097 Equus caballus ENSECAG00000018754 N 0.786
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.743
THOC4 Gallus gallus ENSGALG00000007237 N 0.786
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.729
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.829
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.786
97663 Helobdella robusta 97663 N 0.700
THOC4 Homo sapiens ENSG00000183684 N 0.786
XP_002155396.1 Hydra magnipapillata XP_002155396.1 N 0.700
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.786
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.786
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.786
THOC4 Microcebus murinus ENSMICG00000017403 N 0.786
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.786
Gm5699 Mus musculus ENSMUSG00000087346 N 0.714
Refbp2 Mus musculus ENSMUSG00000060244 N 0.743
Gm5698 Mus musculus ENSMUSG00000086151 N 0.729
Thoc4 Mus musculus ENSMUSG00000025134 N 0.786
ENSMLUG00000002626 Myotis lucifugus ENSMLUG00000002626 N 0.700
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.743
ENSMLUG00000007513 Myotis lucifugus ENSMLUG00000007513 N 0.714
THOC4 Oryzias latipes ENSORLG00000012331 N 0.757
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.786
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.786
e_gw1.77.52.1 Physcomitrella patens e_gw1.77.52.1 N 0.700
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.786
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.786
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.786
Smp_108820 Schistosoma mansoni Smp_108820 N 0.714
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.700
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.800
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.743
ENSTNIG00000014136 Tetraodon nigroviridis ENSTNIG00000014136 N 0.743
fgeneshTA2_pg.C_scaffold_2000899 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_2000899 N 0.700
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.786
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.786
Q58EA2 Xenopus laevis Q58EA2 N 0.786
AAH92013 Xenopus laevis AAH92013 N 0.786
AAH74336 Xenopus laevis AAH74336 N 0.757
Q6GLW1 Xenopus laevis Q6GLW1 N 0.757
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.786