Aqu1.225634 (Amphimedon queenslandica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Aqu1.225634 T49030_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.225634 RRM 95 164

Links

Other RRM family RBPs
Other Amphimedon queenslandica RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.786
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.771
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.771
THOC4 Microcebus murinus ENSMICG00000017403 N 0.771
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.771
THOC4 Gallus gallus ENSGALG00000007237 N 0.771
THOC4 Homo sapiens ENSG00000183684 N 0.771
tho4 Danio rerio ENSDARG00000077732 N 0.771
LOC100055097 Equus caballus ENSECAG00000018754 N 0.771
THOC4 Echinops telfairi ENSETEG00000016596 N 0.771
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.771
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.771
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.771
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.771
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.771
ISCW001860 Ixodes scapularis ISCW001860 N 0.771
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.771
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.771
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.771
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.771
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.771
Thoc4 Mus musculus ENSMUSG00000025134 N 0.771
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.771
AAH92013 Xenopus laevis AAH92013 N 0.771
Q58EA2 Xenopus laevis Q58EA2 N 0.771
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.771
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.771
THOC4 Canis familiaris ENSCAFG00000005877 N 0.771
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.771
GL12678 Drosophila persimilis FBgn0150284 N 0.757
THOC4 Oryzias latipes ENSORLG00000012331 N 0.757
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.757
Q6GLW1 Xenopus laevis Q6GLW1 N 0.757
GA10707-RA Drosophila pseudoobscura FBgn0070763 N 0.757
AAH74336 Xenopus laevis AAH74336 N 0.757
AGAP006733 Anopheles gambiae AGAP006733 N 0.757
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.743
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.743
Refbp2 Mus musculus ENSMUSG00000060244 N 0.743
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.743
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.743
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.743
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.729
GG10124 Drosophila erecta FBgn0102435 N 0.729
GF17326 Drosophila ananassae FBgn0094344 N 0.729
PASA_GEN_1400063 Daphnia pulex PASA_GEN_1400063 N 0.729
GH18594 Drosophila grimshawi FBgn0126061 N 0.729
aly Drosophila yakuba FBgn0068000 N 0.729
GM10513 Drosophila sechellia FBgn0165460 N 0.729
GD19510 Drosophila simulans FBgn0191006 N 0.729
GJ22697 Drosophila virilis FBgn0209801 N 0.729
GI23076 Drosophila mojavensis FBgn0145803 N 0.729
Aly Drosophila melanogaster FBgn0010774 N 0.729
GK12741 Drosophila willistoni FBgn0214750 N 0.729
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.729
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.714
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.714
AAEL015263 Aedes aegypti AAEL015263 N 0.714
fgeneshTA2_pg.C_scaffold_2000899 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_2000899 N 0.714
CpipJ_CPIJ007834 Culex pipiens CpipJ_CPIJ007834 N 0.714
CPIJ007834 Culex quinquefasciatus CPIJ007834 N 0.714
AAEL005114 Aedes aegypti AAEL005114 N 0.714
Gm5699 Mus musculus ENSMUSG00000087346 N 0.700
PHUM023420 Pediculus humanus PHUM023420 N 0.700
ENSORLG00000001620 Oryzias latipes ENSORLG00000001620 N 0.700
Q8MY63_CIOSA Ciona savignyi ENSCSAVG00000003324 N 0.700
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.700
Smp_108820 Schistosoma mansoni Smp_108820 N 0.700
XP_001185635.1 Strongylocentrotus purpuratus XP_001185635.1 N 0.700
XP_782040.2 Strongylocentrotus purpuratus XP_782040.2 N 0.700