CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
RAVER1
(
Sus scrofa
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSSCG00000013650
T41512_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000014512
RRM
78
141
ILIRGLPGDVTNQEVHDLLSDYELKYCFVDKYKGTAFVTLLNGEQAEAAISAFHQSRLRERELS
ENSSSCP00000014512
RRM
151
221
LCVANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLY
ENSSSCP00000014512
RRM
240
310
LCVDHLPPGFSDVDALRRALSTVHTPTFCQLAYGQDGQLKGFAVLEYETAEMAEEAQQRADGLALGGSHLR
Links
Other
RRM
family RBPs
Other
Sus scrofa
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R009605
Ailuropoda melanoleuca
Ame_R009605
N
0.932
RAVER1
Anolis carolinensis
ENSACAG00000008386
N
0.762
A4FUZ2_BOVIN
Bos taurus
ENSBTAG00000015721
N
0.990
RAVER1
Canis familiaris
ENSCAFG00000017861
N
0.985
RAVER1
Cavia porcellus
ENSCPOG00000001008
N
0.951
Raver1
Dipodomys ordii
ENSDORG00000010106
N
0.971
RAVER1
Equus caballus
ENSECAG00000024966
N
0.942
RAVER1
Felis catus
ENSFCAG00000009435
N
0.971
RAVER1
Gorilla gorilla
ENSGGOG00000006015
N
0.927
RAVER1
Homo sapiens
ENSG00000161847
N
0.932
RAVER1
Loxodonta africana
ENSLAFG00000003664
N
0.985
RAVER1
Macaca mulatta
ENSMMUG00000014897
N
0.883
RAVER1
Macropus eugenii
ENSMEUG00000003281
N
0.777
RAVER1
Microcebus murinus
ENSMICG00000010326
N
0.951
RAVER1
Monodelphis domestica
ENSMODG00000005584
N
0.879
Raver1
Mus musculus
ENSMUSG00000010205
N
0.942
RAVER1
Myotis lucifugus
ENSMLUG00000012328
N
0.791
RAVER1
Oryctolagus cuniculus
ENSOCUG00000020918
N
0.947
RAVER1
Oryzias latipes
ENSORLG00000005458
N
0.704
RAVER1
Pan troglodytes
ENSPTRG00000010466
N
0.932
ENSPPYG00000010514
Pongo pygmaeus
ENSPPYG00000010514
N
0.927
RAVER1
Pteropus vampyrus
ENSPVAG00000003689
N
0.976
Raver1
Rattus norvegicus
ENSRNOG00000020710
N
0.956
RAVER1
Spermophilus tridecemlineatus
ENSSTOG00000003241
N
0.966
RAVER1
Tursiops truncatus
ENSTTRG00000009552
N
0.985