cassava28996.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava28996.valid.m1 T49257_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava28996.valid.m1 RRM 77 146
cassava28996.valid.m1 RRM 169 238

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.000
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.000
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.000
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.000
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.000
Pcbp4 Dipodomys ordii ENSDORG00000000573 N 0.000
LOC100060660 Equus caballus ENSECAG00000024218 I 0.000
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.000
PCBP4 Homo sapiens ENSG00000090097 I 0.000
PCBP2 Homo sapiens ENSG00000197111 D 0.000
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.000
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.000
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.000
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.000
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.000
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.000
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.000
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.000
D3ZWQ9_RAT Rattus norvegicus ENSRNOG00000038946 N 0.000
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.000