e_gwW.3.612.1 (Chlamydomonas reinhardtii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gwW.3.612.1 T50328_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gwW.3.612.1 RRM 56 124

Links

Other RRM family RBPs
Other Chlamydomonas reinhardtii RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002864051.1 Arabidopsis lyrata scaffold_801545.1 N 0.783
XM_002873406.1 Arabidopsis lyrata fgenesh2_kg.6__999__AT5G10350.2 N 0.710
XM_002866615.1 Arabidopsis lyrata scaffold_803257.1 N 0.739
ATPABN1 Arabidopsis thaliana AT5G51120-TAIR-G N 0.783
AT5G65260 Arabidopsis thaliana AT5G65260-TAIR-G N 0.739
AT5G10350 Arabidopsis thaliana AT5G10350-TAIR-G N 0.710
BRADI1G45640 Brachypodium distachyon BRADI1G45640 N 0.768
BRADI3G58600 Brachypodium distachyon BRADI3G58600 N 0.754
PK23225.1 Cannabis sativa PK23225.1 N 0.797
PK11764.1 Cannabis sativa PK11764.1 N 0.768
PK03244.1 Cannabis sativa PK03244.1 N 0.754
gw1.9.256.1 Chlorella NC64A gw1.9.256.1 N 0.797
estExt_Genewise1.C_260003 Chlorella vulgaris estExt_Genewise1.C_260003 N 0.783
estExt_Genewise1.C_260068 Coccomyxa C 169 estExt_Genewise1.C_260068 N 0.783
Cucsa.093720 Cucumis sativus Cucsa.093720 N 0.768
Cucsa.093920 Cucumis sativus Cucsa.093920 N 0.797
Cucsa.398220 Cucumis sativus Cucsa.398220 N 0.725
Cucsa.104260 Cucumis sativus Cucsa.104260 N 0.739
Glyma20g34100.1 Glycine max Glyma20g34100.1 N 0.797
Glyma15g06030.1 Glycine max Glyma15g06030.1 N 0.768
Glyma05g31030.1 Glycine max Glyma05g31030.1 N 0.768
Glyma10g33490.1 Glycine max Glyma10g33490.1 N 0.797
Glyma08g18970.1 Glycine max Glyma08g18970.1 N 0.754
Glyma08g14240.1 Glycine max Glyma08g14240.1 N 0.768
MDP0000623378 Malus x domestica MDP0000623378 N 0.739
MDP0000243651 Malus x domestica MDP0000243651 N 0.797
MDP0000562891 Malus x domestica MDP0000562891 N 0.739
cassava44009.valid.m1 Manihot esculenta cassava44009.valid.m1 N 0.797
cassava43221.valid.m1 Manihot esculenta cassava43221.valid.m1 N 0.710
cassava31160.valid.m1 Manihot esculenta cassava31160.valid.m1 N 0.768
cassava18862.valid.m1 Manihot esculenta cassava18862.valid.m1 N 0.812
cassava28879.valid.m1 Manihot esculenta cassava28879.valid.m1 N 0.783
Medtr4g120660 Medicago truncatula Medtr4g120660 N 0.754
Medtr1g087160 Medicago truncatula Medtr1g087160 N 0.768
EuGene.0000060218 Micromonas pusilla EuGene.0000060218 N 0.754
mgf005737m Mimulus guttatus mgf005737m N 0.783
mgf006490m Mimulus guttatus mgf006490m N 0.783
mgf023117m Mimulus guttatus mgf023117m N 0.797
mgf007186m Mimulus guttatus mgf007186m N 0.739
mgf014092m Mimulus guttatus mgf014092m N 0.725
BGIOSIBCE021151 Oryza indica BGIOSIBCE021151 N 0.754
BGIOSIBCE008718 Oryza indica BGIOSIBCE008718 N 0.754
LOC_Os02g52140 Oryza sativa LOC_Os02g52140 N 0.754
LOC_Os06g11620 Oryza sativa LOC_Os06g11620 N 0.797
gwEuk.6.483.1 Ostreococcus lucimarinus gwEuk.6.483.1 N 0.710
gw1.6.1594.1 Ostreococcus RCC809 gw1.6.1594.1 N 0.710
estExt_genewise1.C_Chr_06.00010404 Ostreococcus tauri estExt_genewise1.C_Chr_06.00010404 N 0.768
PDK_20s1311211g001 Phoenix dactylifera PDK_20s1311211g001 N 0.783
estExt_Genewise1.C_4330008 Physcomitrella patens estExt_Genewise1.C_4330008 N 0.783
e_gw1.85.66.1 Physcomitrella patens e_gw1.85.66.1 N 0.783
estExt_fgenesh1_pg.C_4220012 Physcomitrella patens estExt_fgenesh1_pg.C_4220012 N 0.797
estExt_Genewise1.C_30470 Physcomitrella patens estExt_Genewise1.C_30470 N 0.783
POPTR_0005s07440 Populus trichocarpa POPTR_0005s07440 N 0.725
POPTR_0007s05150 Populus trichocarpa POPTR_0007s05150 N 0.710
B9NAP4_POPTR Populus trichocarpa POPTR_0012s11480 N 0.797
B9ICE3_POPTR Populus trichocarpa POPTR_0015s12230 N 0.826
ppa010052m Prunus persica ppa010052m N 0.812
ppa011157m Prunus persica ppa011157m N 0.768
30147.m014356 Ricinus communis 30147.m014356 N 0.812
30147.m014359 Ricinus communis 30147.m014359 N 0.797
29772.m000320 Ricinus communis 29772.m000320 N 0.783
29806.m000954 Ricinus communis 29806.m000954 N 0.725
e_gw1.26.703.1 Selaginella moellendorfii e_gw1.26.703.1 N 0.783
e_gw1.0.1424.1 Selaginella moellendorfii e_gw1.0.1424.1 N 0.754
SB10G007620 Sorghum bicolor Sb10g007620 N 0.783
SB01G028780 Sorghum bicolor Sb01g028780 N 0.710
Sb04g027340 Sorghum bicolor Sb04g027340 N 0.754
UM02401 Ustilago maydis UM02401 N 0.700
GSVIVG00004460001 Vitis vinifera GSVIVG00004460001 N 0.725
estExt_Genewise1.C_10557 Volvox carteri estExt_Genewise1.C_10557 N 0.913
GRMZM2G108919 Zea mays GRMZM2G108919 N 0.754
GRMZM2G082198 Zea mays GRMZM2G082198 N 0.768