ppa025985m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa025985m T58520_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa025985m RRM 83 153

Links

Other RRM family RBPs
Other Prunus persica RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002871058.1 Arabidopsis lyrata scaffold_600404.1 N 0.718
AT5G04600 Arabidopsis thaliana AT5G04600-TAIR-G N 0.718
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.761
PK02111.1 Cannabis sativa PK02111.1 N 0.859
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.704
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.817
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.718
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.873
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.873
MDP0000340057 Malus x domestica MDP0000340057 N 0.930
cassava18017.valid.m1 Manihot esculenta cassava18017.valid.m1 N 0.803
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.873
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.859
mgf009918m Mimulus guttatus mgf009918m N 0.789
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.746
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.775
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.704
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.746
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.859
RO3G_08088 Rhizopus oryzae RO3G_08088 N 0.704
29428.m000321 Ricinus communis 29428.m000321 N 0.845
SPRG_01506 Saprolegnia parasitica SPRG_01506 N 0.718
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.789
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.859
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.789